Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN1P35523 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCN1P35523 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN1P35523 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN1P35523 SLC18A1-201ENST00000265808 2770 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 AC244394.1-201ENST00000435000 1665 ntBASIC15.57■□□□□ 0.08
CLCN1P35523 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCN1P35523 CFAP43-204ENST00000369720 2876 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCN1P35523 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN1P35523 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC15.56■□□□□ 0.08
CLCN1P35523 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN1P35523 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CLCN1P35523 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN1P35523 MANEA-AS1-201ENST00000564541 2268 ntBASIC15.56■□□□□ 0.08
CLCN1P35523 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CLCN1P35523 SYS1-201ENST00000243918 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN1P35523 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN1P35523 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC15.56■□□□□ 0.08
CLCN1P35523 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN1P35523 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN1P35523 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN1P35523 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN1P35523 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CLCN1P35523 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.56■□□□□ 0.08
CLCN1P35523 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC15.56■□□□□ 0.08
CLCN1P35523 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.56■□□□□ 0.08
CLCN1P35523 KLF2P1-201ENST00000447438 1042 ntBASIC15.56■□□□□ 0.08
CLCN1P35523 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.56■□□□□ 0.08
CLCN1P35523 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC15.56■□□□□ 0.08
CLCN1P35523 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.56■□□□□ 0.08
CLCN1P35523 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.56■□□□□ 0.08
CLCN1P35523 MIR4259-201ENST00000584466 101 ntBASIC15.56■□□□□ 0.08
CLCN1P35523 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.56■□□□□ 0.08
CLCN1P35523 AC137695.1-201ENST00000604126 489 ntBASIC15.56■□□□□ 0.08
CLCN1P35523 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN1P35523 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN1P35523 AC061965.1-201ENST00000560524 1465 ntBASIC15.56■□□□□ 0.08
CLCN1P35523 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLCN1P35523 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CLCN1P35523 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.56■□□□□ 0.08
CLCN1P35523 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN1P35523 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
CLCN1P35523 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CLCN1P35523 MFAP4-201ENST00000299610 1873 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN1P35523 MFAP4-203ENST00000497081 1876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN1P35523 ZSCAN21-205ENST00000543588 1870 ntTSL 2 BASIC15.56■□□□□ 0.08
CLCN1P35523 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC15.56■□□□□ 0.08
CLCN1P35523 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC15.56■□□□□ 0.08
CLCN1P35523 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN1P35523 NLRP2-206ENST00000427260 3411 ntTSL 2 BASIC15.56■□□□□ 0.08
CLCN1P35523 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CLCN1P35523 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC15.55■□□□□ 0.08
CLCN1P35523 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 FAM196A-201ENST00000424811 3149 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 CTAGE7P-201ENST00000435712 2436 ntBASIC15.55■□□□□ 0.08
CLCN1P35523 FGF11-202ENST00000572907 2358 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN1P35523 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 AL008718.2-201ENST00000609206 1313 ntBASIC15.55■□□□□ 0.08
CLCN1P35523 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CLCN1P35523 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.55■□□□□ 0.08
CLCN1P35523 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CLCN1P35523 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CLCN1P35523 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CLCN1P35523 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.55■□□□□ 0.08
CLCN1P35523 AC022210.1-201ENST00000449856 793 ntBASIC15.55■□□□□ 0.08
CLCN1P35523 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.55■□□□□ 0.08
CLCN1P35523 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.55■□□□□ 0.08
CLCN1P35523 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.55■□□□□ 0.08
CLCN1P35523 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.55■□□□□ 0.08
CLCN1P35523 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.55■□□□□ 0.08
CLCN1P35523 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN1P35523 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCN1P35523 DUX4L45-201ENST00000566406 1057 ntBASIC15.55■□□□□ 0.08
CLCN1P35523 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC15.55■□□□□ 0.08
CLCN1P35523 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.55■□□□□ 0.08
CLCN1P35523 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC15.55■□□□□ 0.08
CLCN1P35523 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CLCN1P35523 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms