Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GAPDHP04406 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC11.48□□□□□ -0.57
GAPDHP04406 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
GAPDHP04406 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
GAPDHP04406 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GAPDHP04406 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
GAPDHP04406 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
GAPDHP04406 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GAPDHP04406 AL805961.2-201ENST00000642139 4817 ntBASIC11.48□□□□□ -0.57
GAPDHP04406 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GAPDHP04406 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
GAPDHP04406 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC11.47□□□□□ -0.57
GAPDHP04406 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
GAPDHP04406 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC11.47□□□□□ -0.57
GAPDHP04406 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
GAPDHP04406 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC11.47□□□□□ -0.57
GAPDHP04406 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC11.47□□□□□ -0.57
GAPDHP04406 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
GAPDHP04406 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC11.47□□□□□ -0.57
GAPDHP04406 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC11.47□□□□□ -0.57
GAPDHP04406 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC11.47□□□□□ -0.57
GAPDHP04406 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
GAPDHP04406 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
GAPDHP04406 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
GAPDHP04406 LBH-202ENST00000401506 485 ntTSL 3 BASIC11.47□□□□□ -0.57
GAPDHP04406 CYP46A4P-201ENST00000414953 267 ntBASIC11.47□□□□□ -0.57
GAPDHP04406 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC11.47□□□□□ -0.57
GAPDHP04406 Z97180.1-201ENST00000445173 988 ntBASIC11.47□□□□□ -0.57
GAPDHP04406 AC006335.1-201ENST00000445200 547 ntBASIC11.47□□□□□ -0.57
GAPDHP04406 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC11.47□□□□□ -0.57
GAPDHP04406 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC11.47□□□□□ -0.57
GAPDHP04406 SDHD-202ENST00000525291 790 ntTSL 3 BASIC11.47□□□□□ -0.57
GAPDHP04406 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC11.47□□□□□ -0.57
GAPDHP04406 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC11.47□□□□□ -0.57
GAPDHP04406 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
GAPDHP04406 RN7SL774P-201ENST00000577467 290 ntBASIC11.47□□□□□ -0.57
GAPDHP04406 MIR6769A-201ENST00000617340 73 ntBASIC11.47□□□□□ -0.57
GAPDHP04406 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC11.47□□□□□ -0.57
GAPDHP04406 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
GAPDHP04406 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
GAPDHP04406 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
GAPDHP04406 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
GAPDHP04406 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC11.47□□□□□ -0.57
GAPDHP04406 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
GAPDHP04406 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
GAPDHP04406 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GAPDHP04406 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
GAPDHP04406 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
GAPDHP04406 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
GAPDHP04406 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
GAPDHP04406 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC11.46□□□□□ -0.57
GAPDHP04406 ZNF493-208ENST00000599461 1769 ntBASIC11.46□□□□□ -0.57
GAPDHP04406 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
GAPDHP04406 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.46□□□□□ -0.57
GAPDHP04406 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
GAPDHP04406 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
GAPDHP04406 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC11.46□□□□□ -0.57
GAPDHP04406 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
GAPDHP04406 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms