Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.47□□□□□ -0.57
CD74P04233 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 AC106827.1-201ENST00000366454 431 ntBASIC11.47□□□□□ -0.57
CD74P04233 AL035633.1-201ENST00000406139 838 ntBASIC11.47□□□□□ -0.57
CD74P04233 AC079178.1-201ENST00000420915 656 ntBASIC11.47□□□□□ -0.57
CD74P04233 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CD74P04233 VDAC1P1-201ENST00000439229 848 ntBASIC11.47□□□□□ -0.57
CD74P04233 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC11.47□□□□□ -0.57
CD74P04233 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CD74P04233 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC11.47□□□□□ -0.57
CD74P04233 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC11.47□□□□□ -0.57
CD74P04233 AC026369.2-201ENST00000540136 1101 ntTSL 3 BASIC11.47□□□□□ -0.57
CD74P04233 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC11.47□□□□□ -0.57
CD74P04233 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC11.47□□□□□ -0.57
CD74P04233 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC11.47□□□□□ -0.57
CD74P04233 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC11.47□□□□□ -0.57
CD74P04233 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CD74P04233 LINC02560-201ENST00000596379 459 ntBASIC11.47□□□□□ -0.57
CD74P04233 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CD74P04233 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.47□□□□□ -0.57
CD74P04233 AC009108.4-201ENST00000623284 2451 ntBASIC11.47□□□□□ -0.57
CD74P04233 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CD74P04233 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CD74P04233 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 ZNF221-205ENST00000622072 2102 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
CD74P04233 AC073335.2-201ENST00000610177 3441 ntBASIC11.47□□□□□ -0.57
CD74P04233 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 AC067931.2-201ENST00000623655 2003 ntBASIC11.47□□□□□ -0.57
CD74P04233 DDO-201ENST00000368923 1953 ntTSL 2 BASIC11.47□□□□□ -0.57
CD74P04233 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD74P04233 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
CD74P04233 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
CD74P04233 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC11.46□□□□□ -0.57
CD74P04233 AC112176.1-201ENST00000565428 3024 ntBASIC11.46□□□□□ -0.57
CD74P04233 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.46□□□□□ -0.57
CD74P04233 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC11.46□□□□□ -0.57
CD74P04233 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
CD74P04233 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC11.46□□□□□ -0.57
CD74P04233 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC11.46□□□□□ -0.57
CD74P04233 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
CD74P04233 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
CD74P04233 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC11.46□□□□□ -0.57
CD74P04233 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
CD74P04233 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC11.46□□□□□ -0.57
CD74P04233 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC11.46□□□□□ -0.57
CD74P04233 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC11.46□□□□□ -0.57
CD74P04233 CTBP2P5-201ENST00000454986 1264 ntBASIC11.46□□□□□ -0.57
CD74P04233 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
CD74P04233 FADS2-212ENST00000522639 360 ntTSL 5 BASIC11.46□□□□□ -0.57
CD74P04233 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
CD74P04233 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC11.46□□□□□ -0.57
CD74P04233 AC190387.1-201ENST00000551683 408 ntBASIC11.46□□□□□ -0.57
CD74P04233 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
CD74P04233 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
CD74P04233 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
CD74P04233 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
CD74P04233 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC11.46□□□□□ -0.57
CD74P04233 FADS2-215ENST00000574708 385 ntTSL 3 BASIC11.46□□□□□ -0.57
CD74P04233 MIR4745-201ENST00000577608 62 ntBASIC11.46□□□□□ -0.57
CD74P04233 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC11.46□□□□□ -0.57
CD74P04233 AC244157.2-201ENST00000616239 1006 ntBASIC11.46□□□□□ -0.57
CD74P04233 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD74P04233 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC11.46□□□□□ -0.57
CD74P04233 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
CD74P04233 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CD74P04233 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CD74P04233 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
CD74P04233 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CD74P04233 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CD74P04233 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC11.46□□□□□ -0.58
CD74P04233 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CD74P04233 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms