Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 AP002803.1-201ENST00000528836 498 ntBASIC12.57□□□□□ -0.4
CLDN20P56880 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.57□□□□□ -0.4
CLDN20P56880 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.57□□□□□ -0.4
CLDN20P56880 AC132825.4-202ENST00000578792 434 ntBASIC12.57□□□□□ -0.4
CLDN20P56880 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.57□□□□□ -0.4
CLDN20P56880 MIR3180-2-201ENST00000581748 88 ntBASIC12.57□□□□□ -0.4
CLDN20P56880 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.57□□□□□ -0.4
CLDN20P56880 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
CLDN20P56880 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC12.57□□□□□ -0.4
CLDN20P56880 AC087045.2-201ENST00000606279 1003 ntBASIC12.57□□□□□ -0.4
CLDN20P56880 AL031673.1-201ENST00000611460 466 ntBASIC12.57□□□□□ -0.4
CLDN20P56880 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CLDN20P56880 FMO6P-201ENST00000236166 1620 ntBASIC12.57□□□□□ -0.4
CLDN20P56880 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.57□□□□□ -0.4
CLDN20P56880 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.57□□□□□ -0.4
CLDN20P56880 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CLDN20P56880 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
CLDN20P56880 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.57□□□□□ -0.4
CLDN20P56880 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CLDN20P56880 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.57□□□□□ -0.4
CLDN20P56880 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CLDN20P56880 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CLDN20P56880 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 PDXDC2P-206ENST00000534700 1315 ntBASIC12.57□□□□□ -0.4
CLDN20P56880 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.57□□□□□ -0.4
CLDN20P56880 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CLDN20P56880 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CLDN20P56880 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.57□□□□□ -0.4
CLDN20P56880 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.57□□□□□ -0.4
CLDN20P56880 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.57□□□□□ -0.4
CLDN20P56880 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CLDN20P56880 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 AL445250.1-201ENST00000641671 2259 ntBASIC12.57□□□□□ -0.4
CLDN20P56880 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDN20P56880 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.56□□□□□ -0.4
CLDN20P56880 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.56□□□□□ -0.4
CLDN20P56880 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CLDN20P56880 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CLDN20P56880 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CLDN20P56880 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.56□□□□□ -0.4
CLDN20P56880 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.56□□□□□ -0.4
CLDN20P56880 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
CLDN20P56880 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CLDN20P56880 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CLDN20P56880 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.56□□□□□ -0.4
CLDN20P56880 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CLDN20P56880 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.56□□□□□ -0.4
CLDN20P56880 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 Z69890.1-201ENST00000382990 339 ntBASIC12.56□□□□□ -0.4
CLDN20P56880 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.56□□□□□ -0.4
CLDN20P56880 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CLDN20P56880 RN7SKP109-201ENST00000410592 316 ntBASIC12.56□□□□□ -0.4
CLDN20P56880 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.56□□□□□ -0.4
CLDN20P56880 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 GRPEL2P1-201ENST00000453145 339 ntBASIC12.56□□□□□ -0.4
CLDN20P56880 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CLDN20P56880 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.56□□□□□ -0.4
CLDN20P56880 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.56□□□□□ -0.4
CLDN20P56880 AC135983.4-201ENST00000564116 1262 ntBASIC12.56□□□□□ -0.4
CLDN20P56880 AC018635.2-201ENST00000608625 364 ntBASIC12.56□□□□□ -0.4
CLDN20P56880 AC005618.3-201ENST00000624928 458 ntBASIC12.56□□□□□ -0.4
CLDN20P56880 AC093462.1-201ENST00000621167 1683 ntBASIC12.56□□□□□ -0.4
CLDN20P56880 AC019109.1-201ENST00000401725 1874 ntBASIC12.56□□□□□ -0.4
CLDN20P56880 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.56□□□□□ -0.4
CLDN20P56880 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CLDN20P56880 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CLDN20P56880 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms