Protein–RNA interactions for Protein: P42356

PI4KA, Phosphatidylinositol 4-kinase alpha, humanhuman

Predictions only

Length 2,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PI4KAP42356 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PI4KAP42356 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PI4KAP42356 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC13.02□□□□□ -0.33
PI4KAP42356 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PI4KAP42356 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PI4KAP42356 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PI4KAP42356 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PI4KAP42356 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC13.02□□□□□ -0.33
PI4KAP42356 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PI4KAP42356 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PI4KAP42356 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PI4KAP42356 PPP1R26P2-201ENST00000611403 3595 ntBASIC13.02□□□□□ -0.33
PI4KAP42356 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
PI4KAP42356 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PI4KAP42356 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
PI4KAP42356 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PI4KAP42356 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PI4KAP42356 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
PI4KAP42356 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
PI4KAP42356 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 MKL1-204ENST00000402630 747 ntTSL 2 BASIC13.01□□□□□ -0.33
PI4KAP42356 GSTM2P1-201ENST00000405166 654 ntBASIC13.01□□□□□ -0.33
PI4KAP42356 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC13.01□□□□□ -0.33
PI4KAP42356 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC13.01□□□□□ -0.33
PI4KAP42356 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
PI4KAP42356 AC020763.2-201ENST00000623155 1255 ntBASIC13.01□□□□□ -0.33
PI4KAP42356 Z82244.1-201ENST00000631502 840 ntBASIC13.01□□□□□ -0.33
PI4KAP42356 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC13.01□□□□□ -0.33
PI4KAP42356 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 AC034205.3-201ENST00000603595 1376 ntBASIC13.01□□□□□ -0.33
PI4KAP42356 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.01□□□□□ -0.33
PI4KAP42356 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.01□□□□□ -0.33
PI4KAP42356 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 FAM183BP-201ENST00000409072 1595 ntBASIC13.01□□□□□ -0.33
PI4KAP42356 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.01□□□□□ -0.33
PI4KAP42356 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.01□□□□□ -0.33
PI4KAP42356 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.01□□□□□ -0.33
PI4KAP42356 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
PI4KAP42356 MIR193A-201ENST00000384882 88 ntBASIC13.01□□□□□ -0.33
PI4KAP42356 SPTLC1P3-201ENST00000403408 259 ntBASIC13.01□□□□□ -0.33
PI4KAP42356 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 IGHVII-33-1-201ENST00000524010 280 ntBASIC13.01□□□□□ -0.33
PI4KAP42356 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC13.01□□□□□ -0.33
PI4KAP42356 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC13.01□□□□□ -0.33
PI4KAP42356 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 AC245369.8-201ENST00000636589 306 ntBASIC13.01□□□□□ -0.33
PI4KAP42356 AC099795.2-201ENST00000639582 440 ntBASIC13.01□□□□□ -0.33
PI4KAP42356 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC13.01□□□□□ -0.33
PI4KAP42356 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 TUBA3GP-201ENST00000410028 1325 ntBASIC13.01□□□□□ -0.33
PI4KAP42356 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
PI4KAP42356 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.01□□□□□ -0.33
PI4KAP42356 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
PI4KAP42356 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.01□□□□□ -0.33
PI4KAP42356 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PI4KAP42356 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
PI4KAP42356 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
PI4KAP42356 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PI4KAP42356 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PI4KAP42356 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PI4KAP42356 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PI4KAP42356 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
PI4KAP42356 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
PI4KAP42356 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13□□□□□ -0.33
PI4KAP42356 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PI4KAP42356 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PI4KAP42356 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PI4KAP42356 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PI4KAP42356 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
PI4KAP42356 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
PI4KAP42356 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PI4KAP42356 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13□□□□□ -0.33
PI4KAP42356 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms