Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 OAS1-201ENST00000202917 1816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 MIPEPP1-201ENST00000413533 2027 ntBASIC17.87■□□□□ 0.45
USP6P35125 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC17.87■□□□□ 0.45
USP6P35125 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.87■□□□□ 0.45
USP6P35125 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
USP6P35125 GSTM2P1-201ENST00000405166 654 ntBASIC17.87■□□□□ 0.45
USP6P35125 WDR54-202ENST00000409791 854 ntTSL 3 BASIC17.87■□□□□ 0.45
USP6P35125 RN7SKP102-201ENST00000411186 315 ntBASIC17.87■□□□□ 0.45
USP6P35125 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC17.87■□□□□ 0.45
USP6P35125 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC17.87■□□□□ 0.45
USP6P35125 PRDX3P2-201ENST00000447051 611 ntBASIC17.87■□□□□ 0.45
USP6P35125 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC17.87■□□□□ 0.45
USP6P35125 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC17.87■□□□□ 0.45
USP6P35125 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC17.87■□□□□ 0.45
USP6P35125 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 AC006273.1-201ENST00000606966 861 ntBASIC17.87■□□□□ 0.45
USP6P35125 Metazoa_SRP.68-201ENST00000612673 282 ntBASIC17.87■□□□□ 0.45
USP6P35125 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC17.87■□□□□ 0.45
USP6P35125 AL512324.3-201ENST00000619383 882 ntBASIC17.87■□□□□ 0.45
USP6P35125 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC17.87■□□□□ 0.45
USP6P35125 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
USP6P35125 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC17.87■□□□□ 0.45
USP6P35125 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
USP6P35125 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC17.87■□□□□ 0.45
USP6P35125 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC17.87■□□□□ 0.45
USP6P35125 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
USP6P35125 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 F2-205ENST00000530231 1849 ntTSL 5 BASIC17.87■□□□□ 0.45
USP6P35125 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP6P35125 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.86■□□□□ 0.45
USP6P35125 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.86■□□□□ 0.45
USP6P35125 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
USP6P35125 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
USP6P35125 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
USP6P35125 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC17.86■□□□□ 0.45
USP6P35125 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC17.86■□□□□ 0.45
USP6P35125 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.86■□□□□ 0.45
USP6P35125 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC17.86■□□□□ 0.45
USP6P35125 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
USP6P35125 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
USP6P35125 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
USP6P35125 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC17.86■□□□□ 0.45
USP6P35125 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC17.86■□□□□ 0.45
USP6P35125 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC17.86■□□□□ 0.45
USP6P35125 HMGA1P2-201ENST00000430198 324 ntBASIC17.86■□□□□ 0.45
USP6P35125 AC012100.1-201ENST00000470304 282 ntBASIC17.86■□□□□ 0.45
USP6P35125 RN7SL76P-201ENST00000482435 289 ntBASIC17.86■□□□□ 0.45
USP6P35125 CCNL2P1-201ENST00000512846 969 ntBASIC17.86■□□□□ 0.45
USP6P35125 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC17.86■□□□□ 0.45
USP6P35125 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC17.86■□□□□ 0.45
USP6P35125 CYP4F10P-201ENST00000589560 752 ntBASIC17.86■□□□□ 0.45
USP6P35125 AC254633.1-201ENST00000606790 345 ntBASIC17.86■□□□□ 0.45
USP6P35125 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
USP6P35125 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC17.86■□□□□ 0.45
USP6P35125 AC245369.8-201ENST00000636589 306 ntBASIC17.86■□□□□ 0.45
USP6P35125 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
USP6P35125 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
USP6P35125 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
USP6P35125 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
USP6P35125 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
USP6P35125 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP6P35125 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC17.86■□□□□ 0.45
USP6P35125 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
USP6P35125 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms