Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CD40P25942 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.74□□□□□ -0.53
CD40P25942 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC11.74□□□□□ -0.53
CD40P25942 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CD40P25942 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.74□□□□□ -0.53
CD40P25942 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.74□□□□□ -0.53
CD40P25942 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CD40P25942 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 RNA5SP491-201ENST00000362936 118 ntBASIC11.74□□□□□ -0.53
CD40P25942 AL391647.1-201ENST00000395664 511 ntBASIC11.74□□□□□ -0.53
CD40P25942 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC11.74□□□□□ -0.53
CD40P25942 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC11.74□□□□□ -0.53
CD40P25942 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC11.74□□□□□ -0.53
CD40P25942 RPL29P2-202ENST00000498671 657 ntBASIC11.74□□□□□ -0.53
CD40P25942 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC11.74□□□□□ -0.53
CD40P25942 PTK2-225ENST00000520892 571 ntTSL 4 BASIC11.74□□□□□ -0.53
CD40P25942 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC11.74□□□□□ -0.53
CD40P25942 METTL7AP1-201ENST00000547343 496 ntBASIC11.74□□□□□ -0.53
CD40P25942 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC11.74□□□□□ -0.53
CD40P25942 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC11.74□□□□□ -0.53
CD40P25942 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC11.74□□□□□ -0.53
CD40P25942 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC11.74□□□□□ -0.53
CD40P25942 MIR6756-201ENST00000616240 63 ntBASIC11.74□□□□□ -0.53
CD40P25942 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CD40P25942 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CD40P25942 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.74□□□□□ -0.53
CD40P25942 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CD40P25942 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.74□□□□□ -0.53
CD40P25942 FAM90A12P-201ENST00000519497 2375 ntBASIC11.74□□□□□ -0.53
CD40P25942 FAM90A24P-201ENST00000520792 2369 ntBASIC11.74□□□□□ -0.53
CD40P25942 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.74□□□□□ -0.53
CD40P25942 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CD40P25942 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.74□□□□□ -0.53
CD40P25942 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC11.73□□□□□ -0.53
CD40P25942 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CD40P25942 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC11.73□□□□□ -0.53
CD40P25942 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC11.73□□□□□ -0.53
CD40P25942 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CD40P25942 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 PIFO-201ENST00000369737 746 ntTSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 GEMIN8P4-201ENST00000380526 729 ntBASIC11.73□□□□□ -0.53
CD40P25942 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC11.73□□□□□ -0.53
CD40P25942 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 NCLP1-201ENST00000445357 1963 ntBASIC11.73□□□□□ -0.53
CD40P25942 KRT18P66-201ENST00000452970 1269 ntBASIC11.73□□□□□ -0.53
CD40P25942 KRT8P25-201ENST00000473150 1456 ntBASIC11.73□□□□□ -0.53
CD40P25942 AC026470.1-201ENST00000478038 846 ntBASIC11.73□□□□□ -0.53
CD40P25942 RN7SL147P-201ENST00000487345 298 ntBASIC11.73□□□□□ -0.53
CD40P25942 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms