Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TPM3P06753 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TPM3P06753 LINC02228-202ENST00000641261 2489 ntBASIC15.36■□□□□ 0.05
TPM3P06753 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TPM3P06753 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TPM3P06753 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TPM3P06753 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TPM3P06753 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TPM3P06753 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.36■□□□□ 0.05
TPM3P06753 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.36■□□□□ 0.05
TPM3P06753 XBP1P1-201ENST00000436573 652 ntBASIC15.36■□□□□ 0.05
TPM3P06753 BCRP1-201ENST00000444246 691 ntBASIC15.36■□□□□ 0.05
TPM3P06753 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC15.36■□□□□ 0.05
TPM3P06753 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.36■□□□□ 0.05
TPM3P06753 KRT17P7-201ENST00000451704 1104 ntBASIC15.36■□□□□ 0.05
TPM3P06753 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.36■□□□□ 0.05
TPM3P06753 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.36■□□□□ 0.05
TPM3P06753 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TPM3P06753 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.36■□□□□ 0.05
TPM3P06753 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.36■□□□□ 0.05
TPM3P06753 AC023310.1-201ENST00000554836 735 ntBASIC15.36■□□□□ 0.05
TPM3P06753 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.36■□□□□ 0.05
TPM3P06753 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.36■□□□□ 0.05
TPM3P06753 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.36■□□□□ 0.05
TPM3P06753 AL358472.5-202ENST00000641448 1267 ntBASIC15.36■□□□□ 0.05
TPM3P06753 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TPM3P06753 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC15.36■□□□□ 0.05
TPM3P06753 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
TPM3P06753 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
TPM3P06753 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TPM3P06753 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TPM3P06753 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TPM3P06753 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC15.36■□□□□ 0.05
TPM3P06753 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TPM3P06753 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TPM3P06753 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC15.36■□□□□ 0.05
TPM3P06753 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
TPM3P06753 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TPM3P06753 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC15.35■□□□□ 0.05
TPM3P06753 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TPM3P06753 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.35■□□□□ 0.05
TPM3P06753 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC15.35■□□□□ 0.05
TPM3P06753 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TPM3P06753 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 AC126564.1-201ENST00000623628 2013 ntBASIC15.35■□□□□ 0.05
TPM3P06753 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
TPM3P06753 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC15.35■□□□□ 0.05
TPM3P06753 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TPM3P06753 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TPM3P06753 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.35■□□□□ 0.05
TPM3P06753 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.35■□□□□ 0.05
TPM3P06753 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.35■□□□□ 0.05
TPM3P06753 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.35■□□□□ 0.05
TPM3P06753 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 AC092183.1-201ENST00000469884 875 ntBASIC15.35■□□□□ 0.05
TPM3P06753 AC079316.1-201ENST00000548397 411 ntBASIC15.35■□□□□ 0.05
TPM3P06753 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC15.35■□□□□ 0.05
TPM3P06753 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
TPM3P06753 AC244157.2-201ENST00000616239 1006 ntBASIC15.35■□□□□ 0.05
TPM3P06753 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.35■□□□□ 0.05
TPM3P06753 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC15.35■□□□□ 0.05
TPM3P06753 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
TPM3P06753 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TPM3P06753 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 DNM1P41-201ENST00000623634 3350 ntBASIC15.35■□□□□ 0.05
TPM3P06753 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC15.35■□□□□ 0.05
TPM3P06753 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TPM3P06753 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.35■□□□□ 0.05
TPM3P06753 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TPM3P06753 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 POM121L4P-202ENST00000427789 1891 ntBASIC15.35■□□□□ 0.05
TPM3P06753 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC15.35■□□□□ 0.05
TPM3P06753 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.35■□□□□ 0.05
TPM3P06753 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TPM3P06753 AL162615.1-201ENST00000429893 1653 ntBASIC15.35■□□□□ 0.05
TPM3P06753 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TPM3P06753 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms