Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC10.44□□□□□ -0.74
VGLL1Q99990 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC10.44□□□□□ -0.74
VGLL1Q99990 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC10.44□□□□□ -0.74
VGLL1Q99990 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
VGLL1Q99990 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC10.44□□□□□ -0.74
VGLL1Q99990 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC10.44□□□□□ -0.74
VGLL1Q99990 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 AC145098.2-201ENST00000623593 3026 ntBASIC10.44□□□□□ -0.74
VGLL1Q99990 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VGLL1Q99990 EGLN3-205ENST00000547327 2849 ntBASIC10.43□□□□□ -0.74
VGLL1Q99990 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
VGLL1Q99990 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC10.43□□□□□ -0.74
VGLL1Q99990 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC10.43□□□□□ -0.74
VGLL1Q99990 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 CICP9-201ENST00000444451 1913 ntBASIC10.43□□□□□ -0.74
VGLL1Q99990 AC245140.2-201ENST00000624054 1939 ntBASIC10.43□□□□□ -0.74
VGLL1Q99990 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC10.43□□□□□ -0.74
VGLL1Q99990 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC10.43□□□□□ -0.74
VGLL1Q99990 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
VGLL1Q99990 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC10.43□□□□□ -0.74
VGLL1Q99990 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
VGLL1Q99990 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC10.43□□□□□ -0.74
VGLL1Q99990 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC10.43□□□□□ -0.74
VGLL1Q99990 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC10.43□□□□□ -0.74
VGLL1Q99990 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 HNRNPA1P63-201ENST00000427917 963 ntBASIC10.43□□□□□ -0.74
VGLL1Q99990 TSPY25P-201ENST00000429463 745 ntBASIC10.43□□□□□ -0.74
VGLL1Q99990 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 MTX1P1-201ENST00000440904 838 ntBASIC10.43□□□□□ -0.74
VGLL1Q99990 YBX1P6-201ENST00000442962 1002 ntBASIC10.43□□□□□ -0.74
VGLL1Q99990 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC10.43□□□□□ -0.74
VGLL1Q99990 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC10.43□□□□□ -0.74
VGLL1Q99990 NAA50-208ENST00000497255 789 ntTSL 5 BASIC10.43□□□□□ -0.74
VGLL1Q99990 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC10.43□□□□□ -0.74
VGLL1Q99990 RBM7-207ENST00000544582 692 ntTSL 3 BASIC10.43□□□□□ -0.74
VGLL1Q99990 SNX29P1-201ENST00000548357 1007 ntBASIC10.43□□□□□ -0.74
VGLL1Q99990 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC10.43□□□□□ -0.74
VGLL1Q99990 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
VGLL1Q99990 DUX4L45-201ENST00000566406 1057 ntBASIC10.43□□□□□ -0.74
VGLL1Q99990 AC093752.3-201ENST00000567343 901 ntBASIC10.43□□□□□ -0.74
VGLL1Q99990 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
VGLL1Q99990 BNIP3P13-201ENST00000599968 566 ntBASIC10.43□□□□□ -0.74
VGLL1Q99990 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC10.43□□□□□ -0.74
VGLL1Q99990 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC10.43□□□□□ -0.74
VGLL1Q99990 AL023803.2-201ENST00000620080 638 ntBASIC10.43□□□□□ -0.74
VGLL1Q99990 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC10.43□□□□□ -0.74
VGLL1Q99990 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC10.43□□□□□ -0.74
VGLL1Q99990 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC10.43□□□□□ -0.74
VGLL1Q99990 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC10.43□□□□□ -0.74
VGLL1Q99990 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC10.43□□□□□ -0.74
VGLL1Q99990 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC10.43□□□□□ -0.74
VGLL1Q99990 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
VGLL1Q99990 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 AC022400.8-201ENST00000623453 3599 ntBASIC10.43□□□□□ -0.74
VGLL1Q99990 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC10.43□□□□□ -0.74
VGLL1Q99990 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
VGLL1Q99990 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC10.43□□□□□ -0.74
VGLL1Q99990 AC067931.2-201ENST00000623655 2003 ntBASIC10.43□□□□□ -0.74
VGLL1Q99990 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC10.43□□□□□ -0.74
VGLL1Q99990 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC10.43□□□□□ -0.74
VGLL1Q99990 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 HSPA8P9-201ENST00000485881 1943 ntBASIC10.43□□□□□ -0.74
VGLL1Q99990 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
VGLL1Q99990 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VGLL1Q99990 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 AF013593.1-201ENST00000458074 1487 ntBASIC10.42□□□□□ -0.74
VGLL1Q99990 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
VGLL1Q99990 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms