Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TSEN15P1-201ENST00000423257 515 ntBASIC12.06□□□□□ -0.48
AP3S1Q92572 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 FAM86GP-201ENST00000448322 971 ntBASIC12.06□□□□□ -0.48
AP3S1Q92572 FDX1P1-201ENST00000449115 551 ntBASIC12.06□□□□□ -0.48
AP3S1Q92572 BX284668.4-201ENST00000453917 508 ntBASIC12.06□□□□□ -0.48
AP3S1Q92572 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.06□□□□□ -0.48
AP3S1Q92572 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.06□□□□□ -0.48
AP3S1Q92572 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.06□□□□□ -0.48
AP3S1Q92572 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 MIR6720-201ENST00000611664 98 ntBASIC12.06□□□□□ -0.48
AP3S1Q92572 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.06□□□□□ -0.48
AP3S1Q92572 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 AC009108.4-201ENST00000623284 2451 ntBASIC12.06□□□□□ -0.48
AP3S1Q92572 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
AP3S1Q92572 AC080013.1-204ENST00000607426 2185 ntBASIC12.06□□□□□ -0.48
AP3S1Q92572 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC12.06□□□□□ -0.48
AP3S1Q92572 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC12.06□□□□□ -0.48
AP3S1Q92572 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC12.06□□□□□ -0.48
AP3S1Q92572 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP3S1Q92572 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC12.06□□□□□ -0.48
AP3S1Q92572 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
AP3S1Q92572 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 DBIL5P-203ENST00000536214 2677 ntBASIC12.05□□□□□ -0.48
AP3S1Q92572 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.05□□□□□ -0.48
AP3S1Q92572 PPP1R26P1-201ENST00000474415 3613 ntBASIC12.05□□□□□ -0.48
AP3S1Q92572 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC12.05□□□□□ -0.48
AP3S1Q92572 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC12.05□□□□□ -0.48
AP3S1Q92572 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC12.05□□□□□ -0.48
AP3S1Q92572 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.05□□□□□ -0.48
AP3S1Q92572 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 MIR574-201ENST00000385209 96 ntBASIC12.05□□□□□ -0.48
AP3S1Q92572 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.05□□□□□ -0.48
AP3S1Q92572 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.05□□□□□ -0.48
AP3S1Q92572 SRP19-206ENST00000515463 660 ntTSL 3 BASIC12.05□□□□□ -0.48
AP3S1Q92572 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
AP3S1Q92572 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.05□□□□□ -0.48
AP3S1Q92572 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.05□□□□□ -0.48
AP3S1Q92572 AC123567.1-201ENST00000548294 1261 ntBASIC12.05□□□□□ -0.48
AP3S1Q92572 SNHG9-202ENST00000564014 471 ntBASIC12.05□□□□□ -0.48
AP3S1Q92572 AC004449.1-201ENST00000564240 433 ntBASIC12.05□□□□□ -0.48
AP3S1Q92572 AC132192.2-201ENST00000596206 1147 ntBASIC12.05□□□□□ -0.48
AP3S1Q92572 AL136301.1-201ENST00000615830 422 ntBASIC12.05□□□□□ -0.48
AP3S1Q92572 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.05□□□□□ -0.48
AP3S1Q92572 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.05□□□□□ -0.48
AP3S1Q92572 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.05□□□□□ -0.48
AP3S1Q92572 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC12.05□□□□□ -0.48
AP3S1Q92572 AL450468.2-201ENST00000565955 1889 ntBASIC12.05□□□□□ -0.48
AP3S1Q92572 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
AP3S1Q92572 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC12.05□□□□□ -0.48
AP3S1Q92572 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
AP3S1Q92572 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
AP3S1Q92572 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
AP3S1Q92572 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
AP3S1Q92572 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
AP3S1Q92572 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC12.05□□□□□ -0.48
AP3S1Q92572 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP3S1Q92572 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
AP3S1Q92572 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC12.04□□□□□ -0.48
AP3S1Q92572 PPP6C-202ENST00000415905 4172 ntTSL 2 BASIC12.04□□□□□ -0.48
AP3S1Q92572 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
AP3S1Q92572 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 CAPN10-AS1-201ENST00000567819 4000 ntBASIC12.04□□□□□ -0.48
AP3S1Q92572 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.04□□□□□ -0.48
AP3S1Q92572 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms