Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 SNORA50C-201ENST00000408535 133 ntBASIC14.13□□□□□ -0.15
SCG3Q8WXD2 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 RPS9P1-201ENST00000419943 583 ntBASIC14.13□□□□□ -0.15
SCG3Q8WXD2 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 RPL7P35-201ENST00000446943 740 ntBASIC14.13□□□□□ -0.15
SCG3Q8WXD2 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 MIR3147-201ENST00000577811 66 ntBASIC14.13□□□□□ -0.15
SCG3Q8WXD2 MIR3677-201ENST00000578964 60 ntBASIC14.13□□□□□ -0.15
SCG3Q8WXD2 AC007718.1-201ENST00000621078 280 ntBASIC14.13□□□□□ -0.15
SCG3Q8WXD2 SNORA50.1-201ENST00000628590 135 ntBASIC14.13□□□□□ -0.15
SCG3Q8WXD2 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 AGAP12P-201ENST00000585227 2359 ntBASIC14.13□□□□□ -0.15
SCG3Q8WXD2 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 AL139158.3-201ENST00000641212 1562 ntBASIC14.13□□□□□ -0.15
SCG3Q8WXD2 LINC00115-201ENST00000473798 1317 ntBASIC14.13□□□□□ -0.15
SCG3Q8WXD2 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCG3Q8WXD2 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 MKRN5P-201ENST00000445263 1467 ntBASIC14.12□□□□□ -0.15
SCG3Q8WXD2 AC025183.3-201ENST00000623526 1482 ntBASIC14.12□□□□□ -0.15
SCG3Q8WXD2 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 AL807761.2-201ENST00000422849 729 ntBASIC14.12□□□□□ -0.15
SCG3Q8WXD2 AC253536.4-201ENST00000440539 267 ntBASIC14.12□□□□□ -0.15
SCG3Q8WXD2 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 AC079112.1-201ENST00000454972 939 ntBASIC14.12□□□□□ -0.15
SCG3Q8WXD2 CHCHD2P9-201ENST00000461726 456 ntBASIC14.12□□□□□ -0.15
SCG3Q8WXD2 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 MEG3_2.1-201ENST00000611456 105 ntBASIC14.12□□□□□ -0.15
SCG3Q8WXD2 AC087392.5-201ENST00000612517 489 ntBASIC14.12□□□□□ -0.15
SCG3Q8WXD2 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 MIR6727-201ENST00000620702 65 ntBASIC14.12□□□□□ -0.15
SCG3Q8WXD2 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 AC015819.3-201ENST00000624305 2674 ntBASIC14.12□□□□□ -0.15
SCG3Q8WXD2 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 AL359845.1-201ENST00000458202 1648 ntBASIC14.12□□□□□ -0.15
SCG3Q8WXD2 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
SCG3Q8WXD2 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SCG3Q8WXD2 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SCG3Q8WXD2 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCG3Q8WXD2 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SCG3Q8WXD2 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms