Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ATP7AQ04656 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP7AQ04656 FAM95B1-211ENST00000592053 1541 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP7AQ04656 AL669942.1-203ENST00000610972 1541 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP7AQ04656 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP7AQ04656 FHL2-208ENST00000409807 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP7AQ04656 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP7AQ04656 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP7AQ04656 AC138932.1-201ENST00000534164 6830 ntBASIC19.42■□□□□ 0.7
ATP7AQ04656 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP7AQ04656 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP7AQ04656 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP7AQ04656 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP7AQ04656 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ATP7AQ04656 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
ATP7AQ04656 MRPS16P3-201ENST00000415961 374 ntBASIC19.41■□□□□ 0.7
ATP7AQ04656 MTND6P4-201ENST00000506002 522 ntBASIC19.41■□□□□ 0.7
ATP7AQ04656 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC19.41■□□□□ 0.7
ATP7AQ04656 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC19.41■□□□□ 0.7
ATP7AQ04656 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
ATP7AQ04656 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 CNMD-201ENST00000377962 1410 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 IST1-221ENST00000544564 1500 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ATP7AQ04656 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP7AQ04656 AC034238.1-214ENST00000609699 1590 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP7AQ04656 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 M1AP-201ENST00000290536 2543 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP7AQ04656 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ATP7AQ04656 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 SPACA7-201ENST00000283550 795 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ATP7AQ04656 ALDH7A1-203ENST00000413020 1126 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP7AQ04656 RBPMSLP-201ENST00000433427 502 ntBASIC19.41■□□□□ 0.7
ATP7AQ04656 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 RN7SL105P-201ENST00000475661 299 ntBASIC19.41■□□□□ 0.7
ATP7AQ04656 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP7AQ04656 AC013356.4-201ENST00000558421 482 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP7AQ04656 AC133539.1-201ENST00000562644 420 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP7AQ04656 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ATP7AQ04656 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP7AQ04656 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC19.41■□□□□ 0.7
ATP7AQ04656 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP7AQ04656 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC19.41■□□□□ 0.7
ATP7AQ04656 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC19.41■□□□□ 0.7
ATP7AQ04656 AC104440.1-201ENST00000605010 343 ntBASIC19.41■□□□□ 0.7
ATP7AQ04656 AC015912.3-201ENST00000619432 348 ntBASIC19.41■□□□□ 0.7
ATP7AQ04656 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 AC011474.4-201ENST00000623523 2076 ntBASIC19.4■□□□□ 0.7
ATP7AQ04656 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ATP7AQ04656 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP7AQ04656 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP7AQ04656 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 MEFV-209ENST00000541159 1888 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 AL138762.1-201ENST00000608554 1637 ntBASIC19.4■□□□□ 0.7
ATP7AQ04656 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ATP7AQ04656 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 TPD52L3-203ENST00000381428 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC19.4■□□□□ 0.7
ATP7AQ04656 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ATP7AQ04656 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 GNRH2-203ENST00000380346 353 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ATP7AQ04656 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
ATP7AQ04656 SKA1-203ENST00000417656 1095 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP7AQ04656 PHBP11-201ENST00000420550 809 ntBASIC19.4■□□□□ 0.7
ATP7AQ04656 LINC01046-201ENST00000443719 405 ntTSL 3 BASIC19.4■□□□□ 0.7
ATP7AQ04656 AQP7-207ENST00000447660 998 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP7AQ04656 AC142391.1-201ENST00000515823 1002 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ATP7AQ04656 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 AC011603.2-201ENST00000548149 675 ntTSL 3 BASIC19.4■□□□□ 0.7
ATP7AQ04656 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP7AQ04656 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP7AQ04656 AC021683.4-201ENST00000623348 1099 ntBASIC19.4■□□□□ 0.7
ATP7AQ04656 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP7AQ04656 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP7AQ04656 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ATP7AQ04656 USP28-214ENST00000545540 3431 ntTSL 2 BASIC19.39■□□□□ 0.7
ATP7AQ04656 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms