Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNTNAP1P78357 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNTNAP1P78357 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNTNAP1P78357 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNTNAP1P78357 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.87■□□□□ 0.13
CNTNAP1P78357 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNTNAP1P78357 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.87■□□□□ 0.13
CNTNAP1P78357 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNTNAP1P78357 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CNTNAP1P78357 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.87■□□□□ 0.13
CNTNAP1P78357 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15.87■□□□□ 0.13
CNTNAP1P78357 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CNTNAP1P78357 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNTNAP1P78357 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNTNAP1P78357 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNTNAP1P78357 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CNTNAP1P78357 RPE-208ENST00000436630 1128 ntTSL 2 BASIC15.87■□□□□ 0.13
CNTNAP1P78357 TULP3P1-202ENST00000453253 1291 ntBASIC15.87■□□□□ 0.13
CNTNAP1P78357 CXXC1P1-202ENST00000489409 1212 ntBASIC15.87■□□□□ 0.13
CNTNAP1P78357 AC253536.5-201ENST00000506097 347 ntBASIC15.87■□□□□ 0.13
CNTNAP1P78357 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC15.87■□□□□ 0.13
CNTNAP1P78357 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC15.87■□□□□ 0.13
CNTNAP1P78357 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC15.87■□□□□ 0.13
CNTNAP1P78357 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
CNTNAP1P78357 DNM1P50-201ENST00000565767 508 ntBASIC15.87■□□□□ 0.13
CNTNAP1P78357 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC15.87■□□□□ 0.13
CNTNAP1P78357 AC131274.3-201ENST00000578745 1271 ntBASIC15.87■□□□□ 0.13
CNTNAP1P78357 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CNTNAP1P78357 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC15.87■□□□□ 0.13
CNTNAP1P78357 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC15.87■□□□□ 0.13
CNTNAP1P78357 AC099795.2-201ENST00000639582 440 ntBASIC15.87■□□□□ 0.13
CNTNAP1P78357 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNTNAP1P78357 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 AL356583.1-201ENST00000398739 1371 ntBASIC15.86■□□□□ 0.13
CNTNAP1P78357 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 RHPN1-AS1-201ENST00000518049 1918 ntBASIC15.86■□□□□ 0.13
CNTNAP1P78357 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNTNAP1P78357 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNTNAP1P78357 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNTNAP1P78357 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNTNAP1P78357 AC007336.3-201ENST00000623886 2160 ntBASIC15.86■□□□□ 0.13
CNTNAP1P78357 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNTNAP1P78357 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNTNAP1P78357 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNTNAP1P78357 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNTNAP1P78357 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNTNAP1P78357 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNTNAP1P78357 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNTNAP1P78357 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNTNAP1P78357 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNTNAP1P78357 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 PGAM1P10-201ENST00000402426 761 ntBASIC15.86■□□□□ 0.13
CNTNAP1P78357 SERF2-205ENST00000403425 690 ntTSL 2 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CNTNAP1P78357 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 AP003170.2-201ENST00000544730 786 ntBASIC15.86■□□□□ 0.13
CNTNAP1P78357 AP001505.1-201ENST00000569966 824 ntBASIC15.86■□□□□ 0.13
CNTNAP1P78357 RN7SL322P-201ENST00000583519 299 ntBASIC15.86■□□□□ 0.13
CNTNAP1P78357 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC15.86■□□□□ 0.13
CNTNAP1P78357 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CNTNAP1P78357 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNTNAP1P78357 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNTNAP1P78357 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC15.85■□□□□ 0.13
CNTNAP1P78357 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNTNAP1P78357 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.85■□□□□ 0.13
CNTNAP1P78357 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNTNAP1P78357 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
CNTNAP1P78357 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNTNAP1P78357 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CNTNAP1P78357 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CNTNAP1P78357 EGLN3-205ENST00000547327 2849 ntBASIC15.85■□□□□ 0.13
CNTNAP1P78357 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
CNTNAP1P78357 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC15.85■□□□□ 0.13
CNTNAP1P78357 ZNF493-208ENST00000599461 1769 ntBASIC15.85■□□□□ 0.13
CNTNAP1P78357 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNTNAP1P78357 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
CNTNAP1P78357 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNTNAP1P78357 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.85■□□□□ 0.13
CNTNAP1P78357 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNTNAP1P78357 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNTNAP1P78357 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNTNAP1P78357 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNTNAP1P78357 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CNTNAP1P78357 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNTNAP1P78357 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNTNAP1P78357 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CNTNAP1P78357 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms