Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 RAD51C-201ENST00000337432 2591 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
PCP4P48539 TRMT5-201ENST00000261249 5573 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PCP4P48539 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PCP4P48539 LTA4H-201ENST00000228740 2139 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PCP4P48539 BCL2L13-201ENST00000317582 2992 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
PCP4P48539 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PCP4P48539 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC8.61□□□□□ -1.03
PCP4P48539 ST3GAL3-217ENST00000372369 1038 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PCP4P48539 AP002414.1-201ENST00000391405 1147 ntBASIC8.61□□□□□ -1.03
PCP4P48539 MTND6P7-201ENST00000433237 524 ntBASIC8.61□□□□□ -1.03
PCP4P48539 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC8.61□□□□□ -1.03
PCP4P48539 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC8.61□□□□□ -1.03
PCP4P48539 MIR3181-201ENST00000578512 73 ntBASIC8.61□□□□□ -1.03
PCP4P48539 AC024267.1-201ENST00000582320 895 ntBASIC8.61□□□□□ -1.03
PCP4P48539 AP001527.2-201ENST00000614441 631 ntBASIC8.61□□□□□ -1.03
PCP4P48539 HGH1-207ENST00000628266 258 ntTSL 5 BASIC8.61□□□□□ -1.03
PCP4P48539 SART3-201ENST00000228284 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PCP4P48539 MFSD9-201ENST00000258436 4049 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PCP4P48539 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PCP4P48539 GPATCH2L-212ENST00000557263 1458 ntTSL 2 BASIC8.61□□□□□ -1.03
PCP4P48539 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PCP4P48539 ZNF417-201ENST00000312026 3597 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
PCP4P48539 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PCP4P48539 CEP85-209ENST00000640292 2286 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
PCP4P48539 TRMT10A-201ENST00000273962 3694 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PCP4P48539 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PCP4P48539 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
PCP4P48539 ACTR8-201ENST00000335754 3629 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
PCP4P48539 PPIP5K1-202ENST00000348806 5433 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
PCP4P48539 SEC14L6-201ENST00000402034 3392 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
PCP4P48539 GNL3L-201ENST00000336470 2357 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
PCP4P48539 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC8.61□□□□□ -1.03
PCP4P48539 SLC25A19-210ENST00000580994 1554 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
PCP4P48539 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC8.61□□□□□ -1.03
PCP4P48539 NUP188-201ENST00000372577 5689 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 ZP2-203ENST00000574002 2749 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 ZNF772-201ENST00000343280 5419 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 FAM19A1-203ENST00000496687 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 ZNF366-201ENST00000318442 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC8.6□□□□□ -1.03
PCP4P48539 EPB41L2-221ENST00000529208 3023 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
PCP4P48539 LINC01258-201ENST00000512517 2059 ntTSL 2 BASIC8.6□□□□□ -1.03
PCP4P48539 AC012613.2-201ENST00000523176 4533 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 HFE-207ENST00000357618 5286 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 CASP12-203ENST00000422698 1685 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
PCP4P48539 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
PCP4P48539 CYP2AB1P-202ENST00000454440 1456 ntBASIC8.6□□□□□ -1.03
PCP4P48539 SORBS2-209ENST00000418609 5529 ntTSL 2 BASIC8.6□□□□□ -1.03
PCP4P48539 ZNF619-210ENST00000522736 2030 ntTSL 5 BASIC8.6□□□□□ -1.03
PCP4P48539 MAP4-205ENST00000420772 3478 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
PCP4P48539 VDAC1-202ENST00000395044 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 FHAD1-206ENST00000375998 4355 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
PCP4P48539 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.6□□□□□ -1.03
PCP4P48539 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC8.6□□□□□ -1.03
PCP4P48539 CLTA-206ENST00000466396 695 ntTSL 2 BASIC8.6□□□□□ -1.03
PCP4P48539 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC8.6□□□□□ -1.03
PCP4P48539 CNP-204ENST00000472031 1019 ntTSL 2 BASIC8.6□□□□□ -1.03
PCP4P48539 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC8.6□□□□□ -1.03
PCP4P48539 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC8.6□□□□□ -1.03
PCP4P48539 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC8.6□□□□□ -1.03
PCP4P48539 MIR4492-201ENST00000581627 80 ntBASIC8.6□□□□□ -1.03
PCP4P48539 FGF14-AS2-201ENST00000606448 1074 ntBASIC8.6□□□□□ -1.03
PCP4P48539 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 C5orf60-208ENST00000625191 1208 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 VTA1-205ENST00000620996 3272 ntTSL 3 BASIC8.6□□□□□ -1.03
PCP4P48539 CASP4-203ENST00000444739 2158 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 SEZ6L-205ENST00000403121 3078 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 NCR1-205ENST00000594765 1612 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
PCP4P48539 SCML1-201ENST00000380041 1997 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
PCP4P48539 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 SLC4A4-205ENST00000512686 2316 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 LINC00969-212ENST00000445430 4208 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
PCP4P48539 AC005697.2-201ENST00000581901 2266 ntTSL 2 BASIC8.6□□□□□ -1.03
PCP4P48539 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 RPL32-203ENST00000396957 1749 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
PCP4P48539 ZWILCH-202ENST00000446801 3256 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 FO393409.1-201ENST00000399325 1372 ntBASIC8.6□□□□□ -1.03
PCP4P48539 AC105342.1-201ENST00000378334 6848 ntBASIC8.6□□□□□ -1.03
PCP4P48539 AL137783.1-201ENST00000623494 1896 ntBASIC8.6□□□□□ -1.03
PCP4P48539 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
PCP4P48539 ARAP1-205ENST00000426523 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 METTL3-201ENST00000298717 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PCP4P48539 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms