Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MTHFRP42898 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MTHFRP42898 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MTHFRP42898 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MTHFRP42898 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MTHFRP42898 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
MTHFRP42898 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MTHFRP42898 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MTHFRP42898 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MTHFRP42898 KRT8P38-201ENST00000441370 1430 ntBASIC14.25□□□□□ -0.13
MTHFRP42898 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MTHFRP42898 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
MTHFRP42898 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
MTHFRP42898 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MTHFRP42898 HLF-202ENST00000430986 1385 ntTSL 2 BASIC14.25□□□□□ -0.13
MTHFRP42898 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
MTHFRP42898 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
MTHFRP42898 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
MTHFRP42898 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
MTHFRP42898 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MTHFRP42898 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MTHFRP42898 U73169.1-201ENST00000395152 367 ntBASIC14.25□□□□□ -0.13
MTHFRP42898 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
MTHFRP42898 RN7SKP212-201ENST00000410851 328 ntBASIC14.25□□□□□ -0.13
MTHFRP42898 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC14.25□□□□□ -0.13
MTHFRP42898 SNRPCP15-201ENST00000424055 192 ntBASIC14.25□□□□□ -0.13
MTHFRP42898 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC14.25□□□□□ -0.13
MTHFRP42898 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC14.25□□□□□ -0.13
MTHFRP42898 SNRPD2P2-201ENST00000473818 333 ntBASIC14.25□□□□□ -0.13
MTHFRP42898 RN7SL838P-201ENST00000481676 295 ntBASIC14.25□□□□□ -0.13
MTHFRP42898 MARK2P17-201ENST00000498560 841 ntBASIC14.25□□□□□ -0.13
MTHFRP42898 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.25□□□□□ -0.13
MTHFRP42898 RNA5SP420-201ENST00000516997 137 ntBASIC14.25□□□□□ -0.13
MTHFRP42898 LY6E-215ENST00000523847 427 ntTSL 3 BASIC14.25□□□□□ -0.13
MTHFRP42898 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
MTHFRP42898 INO80E-209ENST00000567254 625 ntTSL 2 BASIC14.25□□□□□ -0.13
MTHFRP42898 AC133555.4-201ENST00000569081 152 ntBASIC14.25□□□□□ -0.13
MTHFRP42898 RN7SL440P-201ENST00000577855 343 ntBASIC14.25□□□□□ -0.13
MTHFRP42898 MIR5091-201ENST00000578707 93 ntBASIC14.25□□□□□ -0.13
MTHFRP42898 RN7SL134P-201ENST00000579756 303 ntBASIC14.25□□□□□ -0.13
MTHFRP42898 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MTHFRP42898 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC14.25□□□□□ -0.13
MTHFRP42898 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
MTHFRP42898 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MTHFRP42898 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC14.25□□□□□ -0.13
MTHFRP42898 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC14.25□□□□□ -0.13
MTHFRP42898 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC14.25□□□□□ -0.13
MTHFRP42898 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
MTHFRP42898 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.25□□□□□ -0.13
MTHFRP42898 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.25□□□□□ -0.13
MTHFRP42898 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MTHFRP42898 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MTHFRP42898 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MTHFRP42898 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
MTHFRP42898 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC14.25□□□□□ -0.13
MTHFRP42898 AL050341.2-201ENST00000567508 1541 ntBASIC14.25□□□□□ -0.13
MTHFRP42898 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MTHFRP42898 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
MTHFRP42898 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.25□□□□□ -0.13
MTHFRP42898 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.25□□□□□ -0.13
MTHFRP42898 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
MTHFRP42898 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MTHFRP42898 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC14.25□□□□□ -0.13
MTHFRP42898 RCC2P1-201ENST00000452257 1476 ntBASIC14.25□□□□□ -0.13
MTHFRP42898 AL121753.2-201ENST00000624581 1461 ntBASIC14.25□□□□□ -0.13
MTHFRP42898 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MTHFRP42898 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.24□□□□□ -0.13
MTHFRP42898 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC14.24□□□□□ -0.13
MTHFRP42898 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.24□□□□□ -0.13
MTHFRP42898 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
MTHFRP42898 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 CCL25-202ENST00000315626 450 ntTSL 2 BASIC14.24□□□□□ -0.13
MTHFRP42898 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
MTHFRP42898 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC14.24□□□□□ -0.13
MTHFRP42898 HNRNPA1P25-201ENST00000422644 937 ntBASIC14.24□□□□□ -0.13
MTHFRP42898 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC14.24□□□□□ -0.13
MTHFRP42898 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC14.24□□□□□ -0.13
MTHFRP42898 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC14.24□□□□□ -0.13
MTHFRP42898 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC14.24□□□□□ -0.13
MTHFRP42898 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC14.24□□□□□ -0.13
MTHFRP42898 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC14.24□□□□□ -0.13
MTHFRP42898 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC14.24□□□□□ -0.13
MTHFRP42898 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
MTHFRP42898 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.24□□□□□ -0.13
MTHFRP42898 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.24□□□□□ -0.13
MTHFRP42898 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MTHFRP42898 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms