Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
VTNP04004 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 STK16-202ENST00000409260 1493 ntTSL 5 BASIC14.85□□□□□ -0.03
VTNP04004 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.85□□□□□ -0.03
VTNP04004 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
VTNP04004 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC14.85□□□□□ -0.03
VTNP04004 SDCBP2P1-201ENST00000416115 614 ntBASIC14.85□□□□□ -0.03
VTNP04004 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC14.85□□□□□ -0.03
VTNP04004 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC14.85□□□□□ -0.03
VTNP04004 SNORA47-201ENST00000458862 138 ntBASIC14.85□□□□□ -0.03
VTNP04004 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC14.85□□□□□ -0.03
VTNP04004 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC14.85□□□□□ -0.03
VTNP04004 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 MIR4746-201ENST00000579802 71 ntBASIC14.85□□□□□ -0.03
VTNP04004 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC14.85□□□□□ -0.03
VTNP04004 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC14.85□□□□□ -0.03
VTNP04004 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 AC005562.1-201ENST00000583030 3219 ntBASIC14.85□□□□□ -0.03
VTNP04004 AL359881.3-201ENST00000602640 1721 ntBASIC14.85□□□□□ -0.03
VTNP04004 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
VTNP04004 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.85□□□□□ -0.03
VTNP04004 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.85□□□□□ -0.03
VTNP04004 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.85□□□□□ -0.03
VTNP04004 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.85□□□□□ -0.03
VTNP04004 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
VTNP04004 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VTNP04004 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VTNP04004 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VTNP04004 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
VTNP04004 AC004623.1-201ENST00000624592 2127 ntBASIC14.84□□□□□ -0.03
VTNP04004 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
VTNP04004 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC14.84□□□□□ -0.03
VTNP04004 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.84□□□□□ -0.03
VTNP04004 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
VTNP04004 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VTNP04004 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VTNP04004 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VTNP04004 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VTNP04004 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VTNP04004 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC14.84□□□□□ -0.03
VTNP04004 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.84□□□□□ -0.03
VTNP04004 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC14.84□□□□□ -0.03
VTNP04004 GH1-203ENST00000351388 685 ntTSL 2 BASIC14.84□□□□□ -0.03
VTNP04004 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VTNP04004 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC14.84□□□□□ -0.03
VTNP04004 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
VTNP04004 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
VTNP04004 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VTNP04004 AC234644.1-201ENST00000406065 370 ntBASIC14.84□□□□□ -0.03
VTNP04004 AF274858.1-201ENST00000406288 372 ntBASIC14.84□□□□□ -0.03
VTNP04004 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC14.84□□□□□ -0.03
VTNP04004 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VTNP04004 CDCA4P4-201ENST00000435216 680 ntBASIC14.84□□□□□ -0.03
VTNP04004 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC14.84□□□□□ -0.03
VTNP04004 AC015818.1-201ENST00000451011 244 ntBASIC14.84□□□□□ -0.03
VTNP04004 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC14.84□□□□□ -0.03
VTNP04004 OR4A49P-201ENST00000527050 632 ntBASIC14.84□□□□□ -0.03
VTNP04004 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
VTNP04004 AC091304.3-201ENST00000566500 716 ntBASIC14.84□□□□□ -0.03
VTNP04004 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VTNP04004 HNRNPA1P16-201ENST00000575692 955 ntBASIC14.84□□□□□ -0.03
VTNP04004 KRT8P34-201ENST00000577607 1044 ntBASIC14.84□□□□□ -0.03
VTNP04004 MIR5001-201ENST00000580185 100 ntBASIC14.84□□□□□ -0.03
VTNP04004 AC123912.6-201ENST00000612657 315 ntBASIC14.84□□□□□ -0.03
VTNP04004 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC14.84□□□□□ -0.03
VTNP04004 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VTNP04004 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VTNP04004 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VTNP04004 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.84□□□□□ -0.03
VTNP04004 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC14.84□□□□□ -0.03
VTNP04004 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VTNP04004 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.84□□□□□ -0.03
VTNP04004 AC020931.1-201ENST00000589622 1346 ntBASIC14.84□□□□□ -0.03
VTNP04004 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VTNP04004 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VTNP04004 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VTNP04004 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.84□□□□□ -0.03
VTNP04004 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VTNP04004 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VTNP04004 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC14.84□□□□□ -0.03
VTNP04004 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
VTNP04004 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VTNP04004 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.84□□□□□ -0.03
VTNP04004 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
VTNP04004 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
VTNP04004 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms