Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
APOC1P02654 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
APOC1P02654 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.2□□□□□ -0.46
APOC1P02654 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.2□□□□□ -0.46
APOC1P02654 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
APOC1P02654 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
APOC1P02654 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
APOC1P02654 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.19□□□□□ -0.46
APOC1P02654 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC12.19□□□□□ -0.46
APOC1P02654 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
APOC1P02654 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
APOC1P02654 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
APOC1P02654 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
APOC1P02654 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.19□□□□□ -0.46
APOC1P02654 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.19□□□□□ -0.46
APOC1P02654 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.19□□□□□ -0.46
APOC1P02654 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.19□□□□□ -0.46
APOC1P02654 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.19□□□□□ -0.46
APOC1P02654 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.19□□□□□ -0.46
APOC1P02654 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.19□□□□□ -0.46
APOC1P02654 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.19□□□□□ -0.46
APOC1P02654 AC090857.1-201ENST00000527400 390 ntBASIC12.19□□□□□ -0.46
APOC1P02654 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.19□□□□□ -0.46
APOC1P02654 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.19□□□□□ -0.46
APOC1P02654 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.19□□□□□ -0.46
APOC1P02654 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.19□□□□□ -0.46
APOC1P02654 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.19□□□□□ -0.46
APOC1P02654 AL022328.3-201ENST00000607943 679 ntBASIC12.19□□□□□ -0.46
APOC1P02654 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.19□□□□□ -0.46
APOC1P02654 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.19□□□□□ -0.46
APOC1P02654 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 AC112176.1-201ENST00000565428 3024 ntBASIC12.19□□□□□ -0.46
APOC1P02654 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
APOC1P02654 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.19□□□□□ -0.46
APOC1P02654 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.19□□□□□ -0.46
APOC1P02654 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
APOC1P02654 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.19□□□□□ -0.46
APOC1P02654 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.19□□□□□ -0.46
APOC1P02654 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC12.19□□□□□ -0.46
APOC1P02654 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
APOC1P02654 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
APOC1P02654 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
APOC1P02654 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
APOC1P02654 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC12.18□□□□□ -0.46
APOC1P02654 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
APOC1P02654 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.18□□□□□ -0.46
APOC1P02654 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
APOC1P02654 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.18□□□□□ -0.46
APOC1P02654 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.18□□□□□ -0.46
APOC1P02654 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
APOC1P02654 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.18□□□□□ -0.46
APOC1P02654 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
APOC1P02654 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.18□□□□□ -0.46
APOC1P02654 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.18□□□□□ -0.46
APOC1P02654 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.18□□□□□ -0.46
APOC1P02654 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
APOC1P02654 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.18□□□□□ -0.46
APOC1P02654 LINC00265-2P-201ENST00000413372 782 ntBASIC12.18□□□□□ -0.46
APOC1P02654 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms