Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
KDELR3O43731 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
KDELR3O43731 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC13.78□□□□□ -0.2
KDELR3O43731 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC13.78□□□□□ -0.2
KDELR3O43731 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC13.78□□□□□ -0.2
KDELR3O43731 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
KDELR3O43731 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.78□□□□□ -0.2
KDELR3O43731 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC13.78□□□□□ -0.2
KDELR3O43731 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KDELR3O43731 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
KDELR3O43731 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
KDELR3O43731 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.77□□□□□ -0.2
KDELR3O43731 PCDHA5-203ENST00000614258 4248 ntBASIC13.77□□□□□ -0.2
KDELR3O43731 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.77□□□□□ -0.2
KDELR3O43731 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
KDELR3O43731 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 RBM22P2-201ENST00000393978 1814 ntBASIC13.77□□□□□ -0.21
KDELR3O43731 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC13.77□□□□□ -0.21
KDELR3O43731 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
KDELR3O43731 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC13.77□□□□□ -0.21
KDELR3O43731 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
KDELR3O43731 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC13.77□□□□□ -0.21
KDELR3O43731 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC13.77□□□□□ -0.21
KDELR3O43731 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC13.77□□□□□ -0.21
KDELR3O43731 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC13.77□□□□□ -0.21
KDELR3O43731 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC13.77□□□□□ -0.21
KDELR3O43731 FAM187B2P-201ENST00000577135 713 ntBASIC13.77□□□□□ -0.21
KDELR3O43731 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
KDELR3O43731 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 AL591926.3-201ENST00000611630 238 ntBASIC13.77□□□□□ -0.21
KDELR3O43731 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC13.77□□□□□ -0.21
KDELR3O43731 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC13.77□□□□□ -0.21
KDELR3O43731 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
KDELR3O43731 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.77□□□□□ -0.21
KDELR3O43731 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KDELR3O43731 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.76□□□□□ -0.21
KDELR3O43731 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13.76□□□□□ -0.21
KDELR3O43731 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
KDELR3O43731 AC091807.1-201ENST00000418838 1544 ntBASIC13.76□□□□□ -0.21
KDELR3O43731 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 KRT8P25-201ENST00000473150 1456 ntBASIC13.76□□□□□ -0.21
KDELR3O43731 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
KDELR3O43731 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 KRT18P4-201ENST00000422599 1288 ntBASIC13.76□□□□□ -0.21
KDELR3O43731 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC13.76□□□□□ -0.21
KDELR3O43731 GCSHP3-201ENST00000431120 391 ntBASIC13.76□□□□□ -0.21
KDELR3O43731 AC092810.2-201ENST00000431570 362 ntBASIC13.76□□□□□ -0.21
KDELR3O43731 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC13.76□□□□□ -0.21
KDELR3O43731 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC13.76□□□□□ -0.21
KDELR3O43731 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
KDELR3O43731 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KDELR3O43731 RN7SL582P-201ENST00000491078 279 ntBASIC13.76□□□□□ -0.21
KDELR3O43731 AREG-202ENST00000502307 956 ntTSL 5 BASIC13.76□□□□□ -0.21
KDELR3O43731 AC093909.3-201ENST00000504783 336 ntBASIC13.76□□□□□ -0.21
KDELR3O43731 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC13.76□□□□□ -0.21
KDELR3O43731 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.76□□□□□ -0.21
KDELR3O43731 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms