Protein–RNA interactions for Protein: A6NCE7

MAP1LC3B2, Microtubule-associated proteins 1A/1B light chain 3 beta 2, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B2A6NCE7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 MIR326-201ENST00000362220 95 ntBASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 DNM1P51-201ENST00000558149 522 ntBASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 AL136301.1-201ENST00000615830 422 ntBASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 CICP19-201ENST00000632944 2357 ntBASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
MAP1LC3B2A6NCE7 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 SHROOM2P1-201ENST00000434773 2384 ntBASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 AC007614.5-201ENST00000623424 8892 ntBASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 RBM22P2-201ENST00000393978 1814 ntBASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 AL136309.1-201ENST00000403917 691 ntBASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 AL157407.1-201ENST00000435784 904 ntBASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 AC002472.2-201ENST00000442739 958 ntBASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 AC004890.2-204ENST00000481968 304 ntBASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 TMEM261P1-201ENST00000604899 340 ntBASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 AC006144.1-201ENST00000424220 1600 ntBASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC10.82□□□□□ -0.68
MAP1LC3B2A6NCE7 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms