Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 JAML-201ENST00000292067 1959 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RIMBP3Q9UFD9 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 CD79B-202ENST00000349817 378 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 GPR21-201ENST00000373642 1170 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 TTC32-202ENST00000402414 735 ntTSL 5 BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 AL450304.1-201ENST00000418657 759 ntBASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 FRY-AS1-201ENST00000428419 1115 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 PIEZO1P1-201ENST00000485427 219 ntBASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 BTF3L4-205ENST00000489308 794 ntTSL 2 BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 RNA5SP520-201ENST00000516506 113 ntBASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 RNA5SP523-201ENST00000516858 113 ntBASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 RAB5C-204ENST00000547517 1167 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 AC066612.1-203ENST00000560623 481 ntTSL 4 BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 AC104758.4-201ENST00000565869 353 ntTSL 3 BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 ANKRD20A2-203ENST00000611747 520 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 AL355994.5-201ENST00000613591 236 ntBASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 ANKRD20A4-203ENST00000615302 520 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 AP000866.2-201ENST00000504932 1493 ntTSL 2 BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 AC020910.6-201ENST00000623084 1459 ntBASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 PRAMEF20-202ENST00000602960 1502 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 ARSG-202ENST00000452479 1733 ntTSL 5 BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 OVCH2-203ENST00000612000 1730 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 SULT1A2-201ENST00000335715 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 MIR1273A-201ENST00000408826 103 ntBASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 AC245517.1-201ENST00000444224 1262 ntBASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 AC103591.1-201ENST00000448345 556 ntBASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 VTI1BP1-201ENST00000486325 700 ntBASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 TAGLN3-206ENST00000486460 920 ntTSL 5 BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 AC025752.1-201ENST00000503317 558 ntTSL 4 BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 SLC25A1P5-201ENST00000587610 783 ntBASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 AP001877.1-201ENST00000611253 484 ntBASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 AC244093.4-201ENST00000620689 710 ntTSL 5 BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 AC012486.1-201ENST00000625143 216 ntBASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 AC106774.10-201ENST00000638486 599 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RIMBP3Q9UFD9 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 POPDC2-204ENST00000468801 1345 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 SNAI1-201ENST00000244050 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 DNPEP-220ENST00000523282 1662 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 USP14-208ENST00000582707 1803 ntTSL 5 BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 COA3-201ENST00000328434 771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 UBE2A-201ENST00000346330 718 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 HNRNPA1P49-201ENST00000421336 904 ntBASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 AL590068.2-201ENST00000426067 378 ntTSL 3 BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 FAM238B-203ENST00000434458 880 ntTSL 3 BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 IP6K2-218ENST00000443964 973 ntTSL 4 BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 LINC02105-202ENST00000511953 870 ntTSL 3 BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 AC079385.2-201ENST00000547531 863 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 HIF1A-AS1-201ENST00000557544 652 ntTSL 3 BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 Metazoa_SRP.59-201ENST00000621376 277 ntBASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 AC099804.1-201ENST00000623105 714 ntBASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 PRSS2-204ENST00000632805 807 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 SERTAD3-202ENST00000392028 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 TSN-202ENST00000409193 1436 ntTSL 5 BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC20.3■□□□□ 0.84
RIMBP3Q9UFD9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 AC100803.1-201ENST00000501440 1380 ntTSL 2 BASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 BANF1P4-201ENST00000420029 270 ntBASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 AC093286.1-201ENST00000514761 656 ntBASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 AC139713.1-201ENST00000515019 321 ntBASIC20.29■□□□□ 0.84
RIMBP3Q9UFD9 RAD51-AS1-203ENST00000533146 718 ntTSL 3 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms