Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 AC067931.2-201ENST00000623655 2003 ntBASIC13.15□□□□□ -0.3
VPS37AQ8NEZ2 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
VPS37AQ8NEZ2 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC13.15□□□□□ -0.31
VPS37AQ8NEZ2 AC040160.2-201ENST00000623816 1675 ntBASIC13.15□□□□□ -0.31
VPS37AQ8NEZ2 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
VPS37AQ8NEZ2 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
VPS37AQ8NEZ2 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 BNIP3P42-201ENST00000454982 569 ntBASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 AC104758.3-203ENST00000562938 2123 ntBASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 NDUFB10P1-201ENST00000567319 521 ntBASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 AC132825.4-202ENST00000578792 434 ntBASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 BNIP3P29-201ENST00000598302 571 ntBASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 AC011447.5-201ENST00000616168 564 ntBASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.14□□□□□ -0.31
VPS37AQ8NEZ2 TUBB1P2-201ENST00000422712 1306 ntBASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 TUBB1P1-201ENST00000503144 1300 ntBASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 AL583810.1-201ENST00000553344 1045 ntBASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 MIR4259-201ENST00000584466 101 ntBASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS37AQ8NEZ2 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms