Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MSNP1-201ENST00000511640 1732 ntBASIC14.61□□□□□ -0.07
O00370 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.6□□□□□ -0.07
O00370 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.6□□□□□ -0.07
O00370 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
O00370 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
O00370 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
O00370 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14.6□□□□□ -0.07
O00370 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
O00370 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.6□□□□□ -0.07
O00370 AL031719.1-201ENST00000623365 2587 ntBASIC14.6□□□□□ -0.07
O00370 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
O00370 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 AC073210.1-201ENST00000414799 232 ntBASIC14.6□□□□□ -0.07
O00370 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.6□□□□□ -0.07
O00370 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.6□□□□□ -0.07
O00370 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 AC078991.1-201ENST00000437297 610 ntBASIC14.6□□□□□ -0.07
O00370 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.6□□□□□ -0.07
O00370 AC005077.3-201ENST00000449614 213 ntBASIC14.6□□□□□ -0.07
O00370 RN7SL375P-201ENST00000492442 298 ntBASIC14.6□□□□□ -0.07
O00370 AC093300.1-201ENST00000510368 1201 ntBASIC14.6□□□□□ -0.07
O00370 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.6□□□□□ -0.07
O00370 MIR3180-2-201ENST00000581748 88 ntBASIC14.6□□□□□ -0.07
O00370 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.6□□□□□ -0.07
O00370 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.6□□□□□ -0.07
O00370 AL606495.2-201ENST00000605867 535 ntBASIC14.6□□□□□ -0.07
O00370 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.6□□□□□ -0.07
O00370 AP000322.3-201ENST00000608665 388 ntBASIC14.6□□□□□ -0.07
O00370 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC14.6□□□□□ -0.07
O00370 LINC00244-201ENST00000625073 613 ntBASIC14.6□□□□□ -0.07
O00370 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 AC115284.2-201ENST00000624646 2054 ntBASIC14.6□□□□□ -0.07
O00370 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
O00370 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.6□□□□□ -0.07
O00370 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.6□□□□□ -0.07
O00370 AC006480.2-201ENST00000609770 1337 ntBASIC14.6□□□□□ -0.07
O00370 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.6□□□□□ -0.07
O00370 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC14.6□□□□□ -0.07
O00370 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
O00370 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
O00370 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC14.6□□□□□ -0.07
O00370 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC14.6□□□□□ -0.07
O00370 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
O00370 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC14.59□□□□□ -0.07
O00370 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.59□□□□□ -0.07
O00370 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
O00370 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC14.59□□□□□ -0.07
O00370 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.59□□□□□ -0.07
O00370 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
O00370 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
O00370 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
O00370 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
O00370 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
O00370 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
O00370 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
O00370 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
O00370 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.59□□□□□ -0.07
O00370 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
O00370 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
O00370 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.59□□□□□ -0.07
O00370 HIST2H2BA-201ENST00000412169 381 ntBASIC14.59□□□□□ -0.07
O00370 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
O00370 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
O00370 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.59□□□□□ -0.07
O00370 RPL18AP3-201ENST00000462885 528 ntBASIC14.59□□□□□ -0.07
O00370 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.59□□□□□ -0.07
O00370 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
O00370 TMCO5B-205ENST00000530020 894 ntBASIC14.59□□□□□ -0.07
O00370 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.59□□□□□ -0.07
O00370 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.59□□□□□ -0.07
O00370 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.59□□□□□ -0.07
O00370 AC140113.1-201ENST00000603467 169 ntBASIC14.59□□□□□ -0.07
O00370 AC092171.5-201ENST00000608012 942 ntBASIC14.59□□□□□ -0.07
O00370 MIR6842-201ENST00000612539 65 ntBASIC14.59□□□□□ -0.07
O00370 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
O00370 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
O00370 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
O00370 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
O00370 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
O00370 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
O00370 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
O00370 AC026271.4-201ENST00000578214 1833 ntBASIC14.59□□□□□ -0.07
O00370 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
O00370 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
O00370 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms