Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 DUX4L46-201ENST00000566845 751 ntBASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 AL691403.2-201ENST00000618460 490 ntBASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 PPP1R26P1-201ENST00000474415 3613 ntBASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RCL1Q9Y2P8 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 JTB-202ENST00000356648 1040 ntTSL 2 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 AL355864.2-201ENST00000447420 863 ntBASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 AL355994.2-201ENST00000447882 704 ntBASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 KRT17P7-201ENST00000451704 1104 ntBASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 PGAM1P5-201ENST00000548011 764 ntBASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 AL591163.1-201ENST00000641757 987 ntBASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 LINC01815-202ENST00000641468 1409 ntBASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC11.24□□□□□ -0.61
RCL1Q9Y2P8 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
RCL1Q9Y2P8 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms