Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC12.26□□□□□ -0.45
SSR3Q9UNL2 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 POM121L7P-201ENST00000329949 2404 ntBASIC12.25□□□□□ -0.45
SSR3Q9UNL2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.25□□□□□ -0.45
SSR3Q9UNL2 MRPS18AP1-201ENST00000414458 589 ntBASIC12.25□□□□□ -0.45
SSR3Q9UNL2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 COX5BP1-201ENST00000507622 393 ntBASIC12.25□□□□□ -0.45
SSR3Q9UNL2 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 RNA5SP486-201ENST00000515961 83 ntBASIC12.25□□□□□ -0.45
SSR3Q9UNL2 PTP4A1P2-201ENST00000546033 454 ntBASIC12.25□□□□□ -0.45
SSR3Q9UNL2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 AC010503.4-201ENST00000615487 688 ntBASIC12.25□□□□□ -0.45
SSR3Q9UNL2 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 AL391825.1-201ENST00000457671 1364 ntBASIC12.25□□□□□ -0.45
SSR3Q9UNL2 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 AL162615.1-201ENST00000429893 1653 ntBASIC12.25□□□□□ -0.45
SSR3Q9UNL2 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSR3Q9UNL2 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 AC087499.6-201ENST00000411576 835 ntBASIC12.24□□□□□ -0.45
SSR3Q9UNL2 CICP2-201ENST00000420675 2328 ntBASIC12.24□□□□□ -0.45
SSR3Q9UNL2 AC112492.5-201ENST00000421897 457 ntBASIC12.24□□□□□ -0.45
SSR3Q9UNL2 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 AC004967.1-201ENST00000453589 447 ntBASIC12.24□□□□□ -0.45
SSR3Q9UNL2 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.24□□□□□ -0.45
SSR3Q9UNL2 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms