Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CLDN22Q8N7P3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CLDN22Q8N7P3 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDN22Q8N7P3 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 AC022400.8-201ENST00000623453 3599 ntBASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 RN7SKP214-201ENST00000364208 315 ntBASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 NDUFB10P1-201ENST00000567319 521 ntBASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 AC026740.1-201ENST00000607068 791 ntBASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.51□□□□□ -0.41
CLDN22Q8N7P3 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 COQ10BP2-201ENST00000513804 724 ntBASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 RN7SL219P-201ENST00000582872 296 ntBASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 MIR6752-201ENST00000618442 71 ntBASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN22Q8N7P3 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms