Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 FAM90A11P-201ENST00000518378 2218 ntBASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 AOC4P-203ENST00000566825 2289 ntBASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 AL583810.1-201ENST00000553344 1045 ntBASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 AL356740.1-201ENST00000602192 1297 ntBASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 AC004554.1-201ENST00000422830 1468 ntBASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 AC104758.3-203ENST00000562938 2123 ntBASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC50Q8IVM0 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 ATP5G2P4-201ENST00000442175 420 ntBASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 DUX4L50-201ENST00000455245 715 ntBASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 SLC25A15P3-201ENST00000505530 290 ntBASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 MARK2P5-201ENST00000507649 634 ntBASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 AC044849.1-201ENST00000519737 1188 ntBASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 AC126915.1-201ENST00000522847 1038 ntBASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC50Q8IVM0 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms