Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 AC073585.1-201ENST00000368895 1328 ntBASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 Z98259.1-201ENST00000564261 1697 ntBASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 FTH1P19-201ENST00000402402 528 ntBASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 AC092100.1-201ENST00000435148 702 ntTSL 3 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 HNRNPA1P30-202ENST00000440699 997 ntBASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 BCRP5-201ENST00000514371 253 ntBASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 MYL6-210ENST00000548400 573 ntTSL 3 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 AC106774.4-201ENST00000600799 409 ntBASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 OR4C3-202ENST00000611380 597 ntBASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 CARS-216ENST00000639317 135 ntTSL 5 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTF1AQ7RTS3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
PTF1AQ7RTS3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTF1AQ7RTS3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTF1AQ7RTS3 AC009093.9-201ENST00000566038 1611 ntBASIC17.02■□□□□ 0.31
PTF1AQ7RTS3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.02■□□□□ 0.31
PTF1AQ7RTS3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PTF1AQ7RTS3 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PTF1AQ7RTS3 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
PTF1AQ7RTS3 AC012531.1-201ENST00000562848 2680 ntBASIC17.02■□□□□ 0.31
PTF1AQ7RTS3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PTF1AQ7RTS3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PTF1AQ7RTS3 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 AC016397.2-201ENST00000624848 1985 ntBASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 SNORA50C-201ENST00000408535 133 ntBASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 AL133517.1-201ENST00000413412 748 ntBASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 AK2P2-201ENST00000439142 405 ntBASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 HNRNPA1P7-201ENST00000521273 963 ntBASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 AC015563.2-201ENST00000579580 772 ntTSL 3 BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 AL512631.1-201ENST00000604086 840 ntBASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 Metazoa_SRP.97-201ENST00000618280 304 ntBASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 SNORA50.1-201ENST00000628590 135 ntBASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 POM121L14P-201ENST00000406100 1558 ntBASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTF1AQ7RTS3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTF1AQ7RTS3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTF1AQ7RTS3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PTF1AQ7RTS3 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC17■□□□□ 0.31
PTF1AQ7RTS3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
PTF1AQ7RTS3 CROCCP1-201ENST00000426910 5675 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms