Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
SLC1A1P43005 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.33□□□□□ -0.12
SLC1A1P43005 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
SLC1A1P43005 AC003958.1-201ENST00000435883 421 ntBASIC14.33□□□□□ -0.12
SLC1A1P43005 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.33□□□□□ -0.12
SLC1A1P43005 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC1A1P43005 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.33□□□□□ -0.12
SLC1A1P43005 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.33□□□□□ -0.12
SLC1A1P43005 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SLC1A1P43005 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC1A1P43005 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC1A1P43005 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC1A1P43005 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC1A1P43005 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 NDUFV2P1-201ENST00000596415 907 ntBASIC14.33□□□□□ -0.12
SLC1A1P43005 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SLC1A1P43005 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC1A1P43005 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SLC1A1P43005 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC1A1P43005 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SLC1A1P43005 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
SLC1A1P43005 FAM90A2P-201ENST00000511144 1395 ntBASIC14.33□□□□□ -0.12
SLC1A1P43005 FAM90A25P-201ENST00000528404 1395 ntBASIC14.33□□□□□ -0.12
SLC1A1P43005 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 AC102953.2-201ENST00000609755 3026 ntBASIC14.33□□□□□ -0.12
SLC1A1P43005 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC1A1P43005 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC1A1P43005 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC1A1P43005 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SLC1A1P43005 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SLC1A1P43005 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC1A1P43005 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
SLC1A1P43005 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC1A1P43005 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC1A1P43005 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC1A1P43005 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SLC1A1P43005 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC1A1P43005 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC1A1P43005 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC1A1P43005 MIR557-201ENST00000385239 98 ntBASIC14.32□□□□□ -0.12
SLC1A1P43005 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC1A1P43005 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC1A1P43005 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC1A1P43005 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC1A1P43005 GRPEL2P1-201ENST00000453145 339 ntBASIC14.32□□□□□ -0.12
SLC1A1P43005 SCARNA12-201ENST00000459155 270 ntBASIC14.32□□□□□ -0.12
SLC1A1P43005 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC1A1P43005 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SLC1A1P43005 ZNF767P-206ENST00000513792 565 ntBASIC14.32□□□□□ -0.12
SLC1A1P43005 SAA2-206ENST00000530400 323 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC1A1P43005 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC1A1P43005 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC1A1P43005 AP005264.5-201ENST00000590066 467 ntBASIC14.32□□□□□ -0.12
SLC1A1P43005 AC007326.1-201ENST00000604539 458 ntBASIC14.32□□□□□ -0.12
SLC1A1P43005 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC1A1P43005 MIR6869-201ENST00000619434 62 ntBASIC14.32□□□□□ -0.12
SLC1A1P43005 AC009560.1-201ENST00000620208 434 ntBASIC14.32□□□□□ -0.12
SLC1A1P43005 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC1A1P43005 AC104590.1-202ENST00000558368 1921 ntBASIC14.32□□□□□ -0.12
SLC1A1P43005 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC1A1P43005 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
SLC1A1P43005 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC1A1P43005 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SLC1A1P43005 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC1A1P43005 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC1A1P43005 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC1A1P43005 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC1A1P43005 AC090502.4-201ENST00000551714 1386 ntBASIC14.32□□□□□ -0.12
SLC1A1P43005 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC1A1P43005 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SLC1A1P43005 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC1A1P43005 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC1A1P43005 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC1A1P43005 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC1A1P43005 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC1A1P43005 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SLC1A1P43005 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC1A1P43005 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC1A1P43005 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC14.32□□□□□ -0.12
SLC1A1P43005 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 AC019109.1-201ENST00000401725 1874 ntBASIC14.31□□□□□ -0.12
SLC1A1P43005 AC006372.4-201ENST00000624122 1543 ntBASIC14.31□□□□□ -0.12
SLC1A1P43005 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC1A1P43005 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A1P43005 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A1P43005 ODCP-201ENST00000459650 1639 ntBASIC14.31□□□□□ -0.12
SLC1A1P43005 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC1A1P43005 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A1P43005 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms