Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.51□□□□□ -0.41
HTR1AP08908 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC12.51□□□□□ -0.41
HTR1AP08908 MAX-212ENST00000555932 1673 ntTSL 5 BASIC12.51□□□□□ -0.41
HTR1AP08908 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
HTR1AP08908 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC12.51□□□□□ -0.41
HTR1AP08908 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.51□□□□□ -0.41
HTR1AP08908 AC010336.1-201ENST00000539278 4739 ntBASIC12.51□□□□□ -0.41
HTR1AP08908 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.51□□□□□ -0.41
HTR1AP08908 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 PCDHGB8P-202ENST00000507007 2873 ntBASIC12.51□□□□□ -0.41
HTR1AP08908 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.51□□□□□ -0.41
HTR1AP08908 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.51□□□□□ -0.41
HTR1AP08908 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
HTR1AP08908 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 MIR1202-201ENST00000408529 83 ntBASIC12.51□□□□□ -0.41
HTR1AP08908 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.51□□□□□ -0.41
HTR1AP08908 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.51□□□□□ -0.41
HTR1AP08908 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.51□□□□□ -0.41
HTR1AP08908 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.51□□□□□ -0.41
HTR1AP08908 CHMP1AP1-201ENST00000445563 662 ntBASIC12.51□□□□□ -0.41
HTR1AP08908 AC092183.1-201ENST00000469884 875 ntBASIC12.51□□□□□ -0.41
HTR1AP08908 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.51□□□□□ -0.41
HTR1AP08908 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.51□□□□□ -0.41
HTR1AP08908 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.51□□□□□ -0.41
HTR1AP08908 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.51□□□□□ -0.41
HTR1AP08908 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.51□□□□□ -0.41
HTR1AP08908 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.51□□□□□ -0.41
HTR1AP08908 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.51□□□□□ -0.41
HTR1AP08908 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.51□□□□□ -0.41
HTR1AP08908 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.51□□□□□ -0.41
HTR1AP08908 AC244669.2-201ENST00000612320 853 ntBASIC12.51□□□□□ -0.41
HTR1AP08908 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
HTR1AP08908 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
HTR1AP08908 AL591163.1-201ENST00000641757 987 ntBASIC12.51□□□□□ -0.41
HTR1AP08908 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.51□□□□□ -0.41
HTR1AP08908 RPL13AP3-202ENST00000494676 1473 ntBASIC12.51□□□□□ -0.41
HTR1AP08908 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC12.51□□□□□ -0.41
HTR1AP08908 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.51□□□□□ -0.41
HTR1AP08908 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC12.51□□□□□ -0.41
HTR1AP08908 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC12.51□□□□□ -0.41
HTR1AP08908 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC12.51□□□□□ -0.41
HTR1AP08908 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
HTR1AP08908 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
HTR1AP08908 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
HTR1AP08908 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HTR1AP08908 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.5□□□□□ -0.41
HTR1AP08908 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
HTR1AP08908 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC12.5□□□□□ -0.41
HTR1AP08908 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HTR1AP08908 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC12.5□□□□□ -0.41
HTR1AP08908 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
HTR1AP08908 AC112176.1-201ENST00000565428 3024 ntBASIC12.5□□□□□ -0.41
HTR1AP08908 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
HTR1AP08908 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HTR1AP08908 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.5□□□□□ -0.41
HTR1AP08908 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.5□□□□□ -0.41
HTR1AP08908 CNN2P8-201ENST00000421872 913 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms