Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
CSN3P07498 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CSN3P07498 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CSN3P07498 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC10.91□□□□□ -0.66
CSN3P07498 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CSN3P07498 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CSN3P07498 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
CSN3P07498 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CSN3P07498 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CSN3P07498 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC10.91□□□□□ -0.66
CSN3P07498 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC10.91□□□□□ -0.66
CSN3P07498 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CSN3P07498 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC10.91□□□□□ -0.66
CSN3P07498 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC10.91□□□□□ -0.66
CSN3P07498 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC10.91□□□□□ -0.66
CSN3P07498 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC10.91□□□□□ -0.66
CSN3P07498 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC10.91□□□□□ -0.66
CSN3P07498 CHMP4BP1-201ENST00000556017 588 ntBASIC10.91□□□□□ -0.66
CSN3P07498 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC10.91□□□□□ -0.66
CSN3P07498 AC020922.3-201ENST00000595064 547 ntBASIC10.91□□□□□ -0.66
CSN3P07498 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC10.91□□□□□ -0.66
CSN3P07498 AL022334.2-201ENST00000610000 484 ntBASIC10.91□□□□□ -0.66
CSN3P07498 MIR6769A-201ENST00000617340 73 ntBASIC10.91□□□□□ -0.66
CSN3P07498 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CSN3P07498 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CSN3P07498 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CSN3P07498 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CSN3P07498 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC10.91□□□□□ -0.66
CSN3P07498 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CSN3P07498 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CSN3P07498 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CSN3P07498 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CSN3P07498 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CSN3P07498 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CSN3P07498 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CSN3P07498 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CSN3P07498 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC10.9□□□□□ -0.66
CSN3P07498 AC015909.3-201ENST00000572855 1794 ntBASIC10.9□□□□□ -0.66
CSN3P07498 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC10.9□□□□□ -0.66
CSN3P07498 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
CSN3P07498 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC10.9□□□□□ -0.66
CSN3P07498 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC10.9□□□□□ -0.66
CSN3P07498 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC10.9□□□□□ -0.66
CSN3P07498 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC10.9□□□□□ -0.66
CSN3P07498 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
CSN3P07498 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC10.9□□□□□ -0.66
CSN3P07498 CCT8L1P-201ENST00000465400 1674 ntBASIC10.9□□□□□ -0.66
CSN3P07498 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC10.9□□□□□ -0.66
CSN3P07498 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC10.9□□□□□ -0.66
CSN3P07498 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC10.9□□□□□ -0.66
CSN3P07498 ELK2AP-201ENST00000392510 1007 ntBASIC10.9□□□□□ -0.66
CSN3P07498 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
CSN3P07498 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC10.9□□□□□ -0.66
CSN3P07498 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC10.9□□□□□ -0.66
CSN3P07498 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC10.9□□□□□ -0.66
CSN3P07498 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 DUX4L50-201ENST00000455245 715 ntBASIC10.9□□□□□ -0.66
CSN3P07498 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC10.9□□□□□ -0.66
CSN3P07498 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC10.9□□□□□ -0.66
CSN3P07498 RN7SL277P-201ENST00000481521 288 ntBASIC10.9□□□□□ -0.66
CSN3P07498 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC10.9□□□□□ -0.66
CSN3P07498 RN7SL720P-201ENST00000488178 304 ntBASIC10.9□□□□□ -0.66
CSN3P07498 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC10.9□□□□□ -0.66
CSN3P07498 SUPT4H1P2-201ENST00000501248 353 ntBASIC10.9□□□□□ -0.66
CSN3P07498 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC10.9□□□□□ -0.66
CSN3P07498 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CSN3P07498 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC10.9□□□□□ -0.66
CSN3P07498 CENPX-208ENST00000584347 799 ntTSL 2 BASIC10.9□□□□□ -0.66
CSN3P07498 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC10.9□□□□□ -0.66
CSN3P07498 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC10.9□□□□□ -0.66
CSN3P07498 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 AL353770.1-201ENST00000614915 403 ntBASIC10.9□□□□□ -0.66
CSN3P07498 PPA1-206ENST00000625364 644 ntTSL 5 BASIC10.9□□□□□ -0.66
CSN3P07498 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC10.9□□□□□ -0.66
CSN3P07498 DDC-213ENST00000617822 1809 ntTSL 3 BASIC10.9□□□□□ -0.66
CSN3P07498 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSN3P07498 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms