Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AC093433.1-201ENST00000458048 571 ntBASIC12.26□□□□□ -0.45
APOA1P02647 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.26□□□□□ -0.45
APOA1P02647 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.26□□□□□ -0.45
APOA1P02647 AC097493.3-201ENST00000509725 367 ntBASIC12.26□□□□□ -0.45
APOA1P02647 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.26□□□□□ -0.45
APOA1P02647 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.26□□□□□ -0.45
APOA1P02647 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.26□□□□□ -0.45
APOA1P02647 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.26□□□□□ -0.45
APOA1P02647 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
APOA1P02647 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.26□□□□□ -0.45
APOA1P02647 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.26□□□□□ -0.45
APOA1P02647 AC005252.2-201ENST00000624630 1141 ntBASIC12.26□□□□□ -0.45
APOA1P02647 AC008761.3-201ENST00000624803 892 ntBASIC12.26□□□□□ -0.45
APOA1P02647 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 NLGN3-202ENST00000374051 3913 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 FAM90A17P-201ENST00000533716 1957 ntBASIC12.26□□□□□ -0.45
APOA1P02647 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC12.26□□□□□ -0.45
APOA1P02647 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 ARHGEF10-204ENST00000398564 5480 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
APOA1P02647 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC12.26□□□□□ -0.45
APOA1P02647 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC12.26□□□□□ -0.45
APOA1P02647 AC091181.1-201ENST00000623762 2098 ntBASIC12.26□□□□□ -0.45
APOA1P02647 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 NBPF17P-201ENST00000401087 2119 ntBASIC12.26□□□□□ -0.45
APOA1P02647 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC12.26□□□□□ -0.45
APOA1P02647 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 LAP3P2-201ENST00000454686 1454 ntBASIC12.26□□□□□ -0.45
APOA1P02647 AC007952.5-201ENST00000572818 1486 ntBASIC12.26□□□□□ -0.45
APOA1P02647 G2E3-212ENST00000553504 3796 ntTSL 5 BASIC12.26□□□□□ -0.45
APOA1P02647 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC12.26□□□□□ -0.45
APOA1P02647 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
APOA1P02647 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOA1P02647 OR10H5-202ENST00000642092 7044 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
APOA1P02647 SMAD9-201ENST00000350148 5447 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.25□□□□□ -0.45
APOA1P02647 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC12.25□□□□□ -0.45
APOA1P02647 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 NUTM2B-202ENST00000372321 3970 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
APOA1P02647 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC12.25□□□□□ -0.45
APOA1P02647 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
APOA1P02647 MIR574-201ENST00000385209 96 ntBASIC12.25□□□□□ -0.45
APOA1P02647 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.25□□□□□ -0.45
APOA1P02647 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.25□□□□□ -0.45
APOA1P02647 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
APOA1P02647 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.25□□□□□ -0.45
APOA1P02647 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.25□□□□□ -0.45
APOA1P02647 AC109322.1-201ENST00000524499 1264 ntBASIC12.25□□□□□ -0.45
APOA1P02647 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.25□□□□□ -0.45
APOA1P02647 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.25□□□□□ -0.45
APOA1P02647 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.25□□□□□ -0.45
APOA1P02647 AL359711.2-201ENST00000563105 872 ntBASIC12.25□□□□□ -0.45
APOA1P02647 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.25□□□□□ -0.45
APOA1P02647 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.25□□□□□ -0.45
APOA1P02647 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
APOA1P02647 ENPP7P14-201ENST00000621765 1040 ntBASIC12.25□□□□□ -0.45
APOA1P02647 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.25□□□□□ -0.45
APOA1P02647 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
APOA1P02647 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 COL20A1-201ENST00000358894 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
APOA1P02647 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC12.25□□□□□ -0.45
APOA1P02647 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
APOA1P02647 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.25□□□□□ -0.45
APOA1P02647 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.25□□□□□ -0.45
APOA1P02647 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC12.25□□□□□ -0.45
APOA1P02647 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
APOA1P02647 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
APOA1P02647 TEX13D-201ENST00000632372 4203 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
APOA1P02647 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms