Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CASP4P49662 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CASP4P49662 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CASP4P49662 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.92□□□□□ -0.02
CASP4P49662 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 EEF1GP8-201ENST00000506566 1154 ntBASIC14.92□□□□□ -0.02
CASP4P49662 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.92□□□□□ -0.02
CASP4P49662 AC068867.1-201ENST00000559855 150 ntBASIC14.92□□□□□ -0.02
CASP4P49662 AC079328.1-201ENST00000560358 952 ntBASIC14.92□□□□□ -0.02
CASP4P49662 NAA38-204ENST00000575208 529 ntTSL 3 BASIC14.92□□□□□ -0.02
CASP4P49662 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC14.92□□□□□ -0.02
CASP4P49662 AC016629.1-201ENST00000596579 586 ntBASIC14.92□□□□□ -0.02
CASP4P49662 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.92□□□□□ -0.02
CASP4P49662 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CASP4P49662 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.92□□□□□ -0.02
CASP4P49662 AC011491.1-203ENST00000637688 543 ntBASIC14.92□□□□□ -0.02
CASP4P49662 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.92□□□□□ -0.02
CASP4P49662 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CASP4P49662 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.92□□□□□ -0.02
CASP4P49662 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.92□□□□□ -0.02
CASP4P49662 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CASP4P49662 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.92□□□□□ -0.02
CASP4P49662 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CASP4P49662 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 GHET1-201ENST00000627071 1906 ntBASIC14.92□□□□□ -0.02
CASP4P49662 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 HNRNPLP1-201ENST00000421896 1501 ntBASIC14.92□□□□□ -0.02
CASP4P49662 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CASP4P49662 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CASP4P49662 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.91□□□□□ -0.02
CASP4P49662 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CASP4P49662 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.91□□□□□ -0.02
CASP4P49662 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
CASP4P49662 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CASP4P49662 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.91□□□□□ -0.02
CASP4P49662 PCDHA5-203ENST00000614258 4248 ntBASIC14.91□□□□□ -0.02
CASP4P49662 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CASP4P49662 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.91□□□□□ -0.02
CASP4P49662 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CASP4P49662 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.91□□□□□ -0.02
CASP4P49662 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CASP4P49662 AC093300.1-201ENST00000510368 1201 ntBASIC14.91□□□□□ -0.02
CASP4P49662 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.91□□□□□ -0.02
CASP4P49662 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.91□□□□□ -0.02
CASP4P49662 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CASP4P49662 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC14.91□□□□□ -0.02
CASP4P49662 AC087392.5-201ENST00000612517 489 ntBASIC14.91□□□□□ -0.02
CASP4P49662 MIR6842-201ENST00000612539 65 ntBASIC14.91□□□□□ -0.02
CASP4P49662 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.91□□□□□ -0.02
CASP4P49662 AC068587.10-201ENST00000641210 219 ntBASIC14.91□□□□□ -0.02
CASP4P49662 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
CASP4P49662 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.91□□□□□ -0.02
CASP4P49662 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CASP4P49662 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.91□□□□□ -0.02
CASP4P49662 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CASP4P49662 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CASP4P49662 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CASP4P49662 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.91□□□□□ -0.02
CASP4P49662 POM121L4P-202ENST00000427789 1891 ntBASIC14.91□□□□□ -0.02
CASP4P49662 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CASP4P49662 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CASP4P49662 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms