Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC13.84□□□□□ -0.19
KDELR3O43731 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC13.84□□□□□ -0.19
KDELR3O43731 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
KDELR3O43731 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC13.84□□□□□ -0.19
KDELR3O43731 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
KDELR3O43731 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
KDELR3O43731 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KDELR3O43731 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
KDELR3O43731 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
KDELR3O43731 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
KDELR3O43731 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
KDELR3O43731 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
KDELR3O43731 PPP1R26P2-201ENST00000611403 3595 ntBASIC13.83□□□□□ -0.19
KDELR3O43731 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
KDELR3O43731 AC020658.7-201ENST00000624274 2442 ntBASIC13.83□□□□□ -0.19
KDELR3O43731 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
KDELR3O43731 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC13.83□□□□□ -0.2
KDELR3O43731 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.83□□□□□ -0.2
KDELR3O43731 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 POM121L4P-202ENST00000427789 1891 ntBASIC13.83□□□□□ -0.2
KDELR3O43731 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.83□□□□□ -0.2
KDELR3O43731 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 CA6-205ENST00000480186 1493 ntTSL 2 BASIC13.83□□□□□ -0.2
KDELR3O43731 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
KDELR3O43731 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.83□□□□□ -0.2
KDELR3O43731 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
KDELR3O43731 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC13.83□□□□□ -0.2
KDELR3O43731 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.83□□□□□ -0.2
KDELR3O43731 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC13.83□□□□□ -0.2
KDELR3O43731 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC13.83□□□□□ -0.2
KDELR3O43731 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC13.83□□□□□ -0.2
KDELR3O43731 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC13.83□□□□□ -0.2
KDELR3O43731 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
KDELR3O43731 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC13.83□□□□□ -0.2
KDELR3O43731 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 AL031595.1-201ENST00000623969 4709 ntBASIC13.83□□□□□ -0.2
KDELR3O43731 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.83□□□□□ -0.2
KDELR3O43731 HNRNPLP1-201ENST00000421896 1501 ntBASIC13.83□□□□□ -0.2
KDELR3O43731 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.83□□□□□ -0.2
KDELR3O43731 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
KDELR3O43731 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.83□□□□□ -0.2
KDELR3O43731 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.83□□□□□ -0.2
KDELR3O43731 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.83□□□□□ -0.2
KDELR3O43731 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
KDELR3O43731 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KDELR3O43731 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
KDELR3O43731 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
KDELR3O43731 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 C8orf49-201ENST00000525043 1968 ntBASIC13.82□□□□□ -0.2
KDELR3O43731 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 GBAP1-208ENST00000566701 1546 ntBASIC13.82□□□□□ -0.2
KDELR3O43731 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 STK16-203ENST00000409516 895 ntTSL 2 BASIC13.82□□□□□ -0.2
KDELR3O43731 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC13.82□□□□□ -0.2
KDELR3O43731 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.82□□□□□ -0.2
KDELR3O43731 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC13.82□□□□□ -0.2
KDELR3O43731 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC13.82□□□□□ -0.2
KDELR3O43731 CTBP2P4-201ENST00000513884 920 ntBASIC13.82□□□□□ -0.2
KDELR3O43731 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.82□□□□□ -0.2
KDELR3O43731 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.82□□□□□ -0.2
KDELR3O43731 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.82□□□□□ -0.2
KDELR3O43731 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC13.82□□□□□ -0.2
KDELR3O43731 U62317.3-201ENST00000608319 855 ntBASIC13.82□□□□□ -0.2
KDELR3O43731 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
KDELR3O43731 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC13.82□□□□□ -0.2
KDELR3O43731 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KDELR3O43731 CICP4-201ENST00000447359 2812 ntBASIC13.82□□□□□ -0.2
KDELR3O43731 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms