Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
NACAE9PAV3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NACAE9PAV3 FAM49B-215ENST00000519824 3798 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
NACAE9PAV3 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
NACAE9PAV3 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC10.17□□□□□ -0.78
NACAE9PAV3 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
NACAE9PAV3 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
NACAE9PAV3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
NACAE9PAV3 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC10.17□□□□□ -0.78
NACAE9PAV3 AC015909.3-201ENST00000572855 1794 ntBASIC10.17□□□□□ -0.78
NACAE9PAV3 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC10.17□□□□□ -0.78
NACAE9PAV3 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
NACAE9PAV3 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC10.17□□□□□ -0.78
NACAE9PAV3 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
NACAE9PAV3 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC10.17□□□□□ -0.78
NACAE9PAV3 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
NACAE9PAV3 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC10.17□□□□□ -0.78
NACAE9PAV3 RN7SKP214-201ENST00000364208 315 ntBASIC10.17□□□□□ -0.78
NACAE9PAV3 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
NACAE9PAV3 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 XBP1P1-201ENST00000436573 652 ntBASIC10.17□□□□□ -0.78
NACAE9PAV3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC10.17□□□□□ -0.78
NACAE9PAV3 PGAM1P5-201ENST00000548011 764 ntBASIC10.17□□□□□ -0.78
NACAE9PAV3 AL512310.5-201ENST00000551999 515 ntBASIC10.17□□□□□ -0.78
NACAE9PAV3 MAX-218ENST00000557746 571 ntTSL 4 BASIC10.17□□□□□ -0.78
NACAE9PAV3 EID1-202ENST00000560490 584 ntTSL 3 BASIC10.17□□□□□ -0.78
NACAE9PAV3 AL022334.2-201ENST00000610000 484 ntBASIC10.17□□□□□ -0.78
NACAE9PAV3 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
NACAE9PAV3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC10.17□□□□□ -0.78
NACAE9PAV3 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
NACAE9PAV3 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
NACAE9PAV3 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 RCC2P1-201ENST00000452257 1476 ntBASIC10.17□□□□□ -0.78
NACAE9PAV3 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC10.17□□□□□ -0.78
NACAE9PAV3 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC10.17□□□□□ -0.78
NACAE9PAV3 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
NACAE9PAV3 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC10.16□□□□□ -0.78
NACAE9PAV3 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
NACAE9PAV3 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
NACAE9PAV3 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC10.16□□□□□ -0.78
NACAE9PAV3 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 TUBBP5-203ENST00000508529 1334 ntBASIC10.16□□□□□ -0.78
NACAE9PAV3 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 DPM3-202ENST00000368399 517 ntBASIC10.16□□□□□ -0.78
NACAE9PAV3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 SLC16A6P1-201ENST00000413214 1059 ntBASIC10.16□□□□□ -0.78
NACAE9PAV3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC10.16□□□□□ -0.78
NACAE9PAV3 AC006122.1-201ENST00000493323 440 ntBASIC10.16□□□□□ -0.78
NACAE9PAV3 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC10.16□□□□□ -0.78
NACAE9PAV3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC10.16□□□□□ -0.78
NACAE9PAV3 AC009779.1-201ENST00000551138 283 ntBASIC10.16□□□□□ -0.78
NACAE9PAV3 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC10.16□□□□□ -0.78
NACAE9PAV3 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC10.16□□□□□ -0.78
NACAE9PAV3 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC10.16□□□□□ -0.78
NACAE9PAV3 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC10.16□□□□□ -0.78
NACAE9PAV3 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
NACAE9PAV3 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
NACAE9PAV3 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC10.16□□□□□ -0.78
NACAE9PAV3 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC10.16□□□□□ -0.78
NACAE9PAV3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC10.16□□□□□ -0.78
NACAE9PAV3 AC114271.1-201ENST00000612689 2813 ntBASIC10.16□□□□□ -0.78
NACAE9PAV3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC10.16□□□□□ -0.78
NACAE9PAV3 ATAD2B-201ENST00000238789 8103 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
NACAE9PAV3 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC10.16□□□□□ -0.78
NACAE9PAV3 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
NACAE9PAV3 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
NACAE9PAV3 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms