Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 AC008620.2-201ENST00000510294 1569 ntBASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 AL133338.1-201ENST00000565695 1517 ntBASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB13Q9Y5F0 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 RABGGTB-201ENST00000319942 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 AC004554.1-201ENST00000422830 1468 ntBASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 KRT8P31-201ENST00000504812 1408 ntBASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 AC105206.1-202ENST00000314927 2368 ntBASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 RNU6-233P-201ENST00000410845 141 ntBASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 RPL37A-205ENST00000446558 495 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 SLC25A15P3-201ENST00000505530 290 ntBASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 MTND1P22-201ENST00000510572 951 ntBASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 AL117351.2-201ENST00000513571 157 ntBASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 AC026803.1-201ENST00000569130 274 ntBASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 AC020922.3-201ENST00000595064 547 ntBASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 AC079336.7-201ENST00000623428 1078 ntBASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 AC026422.1-201ENST00000623961 452 ntBASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 AL139099.5-201ENST00000635274 300 ntBASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB13Q9Y5F0 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 AC012321.1-201ENST00000561622 1588 ntBASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 STX3-207ENST00000633708 3111 ntTSL 5 BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 UGT1A10-202ENST00000373445 2065 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.52■□□□□ 0.07
PCDHB13Q9Y5F0 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB13Q9Y5F0 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms