Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TMEM254-202ENST00000372274 481 ntTSL 2 BASIC20.42■□□□□ 0.86
RIMBP3Q9UFD9 SNORA50B-201ENST00000517198 135 ntBASIC20.42■□□□□ 0.86
RIMBP3Q9UFD9 MRPS28-208ENST00000521605 437 ntTSL 2 BASIC20.42■□□□□ 0.86
RIMBP3Q9UFD9 AC011092.1-201ENST00000533128 1047 ntBASIC20.42■□□□□ 0.86
RIMBP3Q9UFD9 AC009309.1-201ENST00000610262 460 ntBASIC20.42■□□□□ 0.86
RIMBP3Q9UFD9 AC005086.3-201ENST00000624984 219 ntBASIC20.42■□□□□ 0.86
RIMBP3Q9UFD9 SNORA50B-202ENST00000630737 137 ntBASIC20.42■□□□□ 0.86
RIMBP3Q9UFD9 GSTM4-213ENST00000638994 657 ntTSL 5 BASIC20.42■□□□□ 0.86
RIMBP3Q9UFD9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RIMBP3Q9UFD9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 AL359220.1-201ENST00000554086 781 ntTSL 3 BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 KRT18P7-201ENST00000557241 1219 ntBASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 HEXA-209ENST00000567159 1582 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RIMBP3Q9UFD9 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 AC012617.1-204ENST00000586340 2305 ntBASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 AL121900.1-201ENST00000428285 1695 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 SNORA50C-201ENST00000408535 133 ntBASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 AC097638.1-201ENST00000413663 515 ntBASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 AK2P2-201ENST00000439142 405 ntBASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 AL133163.1-201ENST00000459899 949 ntBASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 CHMP2A-206ENST00000600118 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 AC013564.1-201ENST00000612806 707 ntBASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 SNORA50.1-201ENST00000628590 135 ntBASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 GAPDHP74-202ENST00000632456 782 ntBASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 TOP1MT-213ENST00000521193 1960 ntTSL 2 BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 WDSUB1-204ENST00000409124 1600 ntTSL 5 BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 AC073862.3-201ENST00000624597 1648 ntBASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIMBP3Q9UFD9 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC20.39■□□□□ 0.86
RIMBP3Q9UFD9 NDRG4-254ENST00000569923 1312 ntTSL 2 BASIC20.39■□□□□ 0.86
RIMBP3Q9UFD9 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC20.39■□□□□ 0.86
RIMBP3Q9UFD9 NMRAL2P-201ENST00000306399 891 ntBASIC20.39■□□□□ 0.86
RIMBP3Q9UFD9 NDUFB8-203ENST00000370322 713 ntTSL 2 BASIC20.39■□□□□ 0.86
RIMBP3Q9UFD9 MIR219A2-202ENST00000385220 97 ntBASIC20.39■□□□□ 0.86
RIMBP3Q9UFD9 MAPK12-202ENST00000395778 605 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RIMBP3Q9UFD9 AL031575.1-201ENST00000416609 845 ntBASIC20.39■□□□□ 0.86
RIMBP3Q9UFD9 BX571846.1-201ENST00000447347 553 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RIMBP3Q9UFD9 GUSBP1-201ENST00000449061 758 ntBASIC20.39■□□□□ 0.86
RIMBP3Q9UFD9 AC068298.1-201ENST00000465165 161 ntBASIC20.39■□□□□ 0.86
RIMBP3Q9UFD9 NEDD8-MDP1-202ENST00000534348 595 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
RIMBP3Q9UFD9 AC009654.1-201ENST00000560503 757 ntTSL 3 BASIC20.39■□□□□ 0.86
RIMBP3Q9UFD9 AC090282.1-202ENST00000575487 515 ntTSL 4 BASIC20.39■□□□□ 0.86
RIMBP3Q9UFD9 AL121845.4-201ENST00000613401 306 ntBASIC20.39■□□□□ 0.86
RIMBP3Q9UFD9 LINC00680-206ENST00000635948 181 ntBASIC20.39■□□□□ 0.86
RIMBP3Q9UFD9 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC20.39■□□□□ 0.86
RIMBP3Q9UFD9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RIMBP3Q9UFD9 STAU2-202ENST00000517542 1695 ntTSL 2 BASIC20.39■□□□□ 0.85
RIMBP3Q9UFD9 SEPT4-203ENST00000393086 1556 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RIMBP3Q9UFD9 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC20.39■□□□□ 0.85
RIMBP3Q9UFD9 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RIMBP3Q9UFD9 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RIMBP3Q9UFD9 RFC4-202ENST00000392481 1448 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RIMBP3Q9UFD9 AL445675.1-201ENST00000603868 1410 ntBASIC20.39■□□□□ 0.85
RIMBP3Q9UFD9 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RIMBP3Q9UFD9 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RIMBP3Q9UFD9 KRT8P40-201ENST00000392131 563 ntBASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 SRMP1-201ENST00000398959 885 ntBASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 KRTAP10-6-201ENST00000400368 1238 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 AC005587.1-201ENST00000401879 592 ntBASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 MSMP-202ENST00000436428 670 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 LRTOMT-208ENST00000439209 801 ntTSL 3 BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 RPL7AP11-201ENST00000486538 799 ntBASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 UBTFL1-201ENST00000530464 1182 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 AC090844.3-201ENST00000583462 784 ntTSL 3 BASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 AC026304.1-201ENST00000597953 561 ntBASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 GOLGA8IP-202ENST00000611635 2100 ntBASIC20.38■□□□□ 0.85
RIMBP3Q9UFD9 PINLYP-207ENST00000612042 914 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms