Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 SOD2-202ENST00000367054 815 ntTSL 2 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 AL391647.1-201ENST00000395664 511 ntBASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 IGHV3-37-201ENST00000518544 340 ntBASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 RNF146-211ENST00000609447 607 ntTSL 4 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 AC084781.1-201ENST00000613737 656 ntBASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 AC004623.1-201ENST00000624592 2127 ntBASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 ODCP-201ENST00000459650 1639 ntBASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 AC118758.2-201ENST00000614242 2813 ntBASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CUEDC1Q9NWM3 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 AC018638.5-201ENST00000450885 754 ntBASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 GRPEL2P1-201ENST00000453145 339 ntBASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 CHCHD2P9-201ENST00000461726 456 ntBASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 AC007688.1-201ENST00000475592 759 ntBASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 RN7SL81P-201ENST00000493781 261 ntBASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 RN7SL564P-201ENST00000496309 250 ntBASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 COQ10BP2-201ENST00000513804 724 ntBASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 AL359845.1-201ENST00000458202 1648 ntBASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.37□□□□□ -0.27
CUEDC1Q9NWM3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms