Protein–RNA interactions for Protein: Q8TBY8

PMFBP1, Polyamine-modulated factor 1-binding protein 1, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1Q8TBY8 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 MIR611-201ENST00000384869 67 ntBASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 SDCBP2P1-201ENST00000416115 614 ntBASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 AC006986.1-201ENST00000612764 241 ntBASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PMFBP1Q8TBY8 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 SNORD23-201ENST00000408876 110 ntBASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 MED15P3-201ENST00000413613 326 ntBASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 DNM1P46-202ENST00000415963 882 ntBASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 AC006328.1-201ENST00000437571 379 ntBASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 AC092865.2-201ENST00000439409 971 ntBASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 PIGCP1-201ENST00000527583 895 ntBASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 AP003040.1-201ENST00000532044 1024 ntBASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 AC024075.2-201ENST00000598112 1473 ntBASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 AL121753.2-201ENST00000624581 1461 ntBASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 TCAM1P-207ENST00000485295 1537 ntBASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PMFBP1Q8TBY8 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PMFBP1Q8TBY8 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PMFBP1Q8TBY8 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PMFBP1Q8TBY8 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PMFBP1Q8TBY8 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PMFBP1Q8TBY8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PMFBP1Q8TBY8 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PMFBP1Q8TBY8 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC18.67■□□□□ 0.58
PMFBP1Q8TBY8 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC18.67■□□□□ 0.58
PMFBP1Q8TBY8 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC18.67■□□□□ 0.58
PMFBP1Q8TBY8 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PMFBP1Q8TBY8 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC18.67■□□□□ 0.58
PMFBP1Q8TBY8 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC18.67■□□□□ 0.58
PMFBP1Q8TBY8 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PMFBP1Q8TBY8 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PMFBP1Q8TBY8 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PMFBP1Q8TBY8 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms