Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC110048.1-201ENST00000604293 2157 ntBASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 DPM3-202ENST00000368399 517 ntBASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 AL591846.1-201ENST00000451736 433 ntBASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 RCC2P8-201ENST00000502779 1035 ntBASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 Z98885.3-201ENST00000624882 1757 ntBASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC50Q8IVM0 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 AC006987.1-201ENST00000413610 527 ntBASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 SERPINA13P-202ENST00000478994 924 ntBASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 FAM8A2P-201ENST00000528813 1142 ntBASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 AL161773.1-201ENST00000624845 863 ntBASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 AC015819.3-201ENST00000624305 2674 ntBASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC50Q8IVM0 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.58□□□□□ -0.07
CCDC50Q8IVM0 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC50Q8IVM0 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC50Q8IVM0 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC50Q8IVM0 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
CCDC50Q8IVM0 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC14.58□□□□□ -0.07
CCDC50Q8IVM0 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC50Q8IVM0 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC14.58□□□□□ -0.07
CCDC50Q8IVM0 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 AC115284.2-201ENST00000624646 2054 ntBASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 AC026271.4-201ENST00000578214 1833 ntBASIC14.58□□□□□ -0.08
CCDC50Q8IVM0 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms