Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 KRT18P42-201ENST00000505048 1255 ntBASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 AP001102.1-201ENST00000528959 409 ntBASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 CICP16-201ENST00000502609 2813 ntBASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 AC012358.2-201ENST00000430010 1434 ntBASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 AL928654.5-201ENST00000624831 2501 ntBASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 AC090643.2-201ENST00000623442 2029 ntBASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 AP000437.1-201ENST00000624057 2085 ntBASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 RN7SKP255-201ENST00000363442 313 ntBASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 RN7SKP203-201ENST00000363618 332 ntBASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 RN7SKP71-201ENST00000364558 318 ntBASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 7SK.1-201ENST00000365328 331 ntBASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 OR2T32P-201ENST00000403423 963 ntBASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 CRIP1P2-201ENST00000425396 228 ntBASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 AC010997.1-201ENST00000447646 350 ntBASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 RN7SL173P-201ENST00000461853 292 ntBASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 FAM86JP-202ENST00000484500 988 ntBASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 MST1L-204ENST00000545160 559 ntTSL 4 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 CDC37P2-201ENST00000562287 1029 ntBASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 AC091691.1-201ENST00000583587 1018 ntBASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms