Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC026120.2-201ENST00000617239 309 ntBASIC15.11■□□□□ 0.01
GPC3P51654 AC073869.4-201ENST00000620841 800 ntBASIC15.11■□□□□ 0.01
GPC3P51654 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.11■□□□□ 0.01
GPC3P51654 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
GPC3P51654 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 AC245140.2-201ENST00000624054 1939 ntBASIC15.11■□□□□ 0.01
GPC3P51654 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC15.11■□□□□ 0.01
GPC3P51654 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
GPC3P51654 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC3P51654 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.1■□□□□ 0.01
GPC3P51654 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC15.1■□□□□ 0.01
GPC3P51654 F2-205ENST00000530231 1849 ntTSL 5 BASIC15.1■□□□□ 0.01
GPC3P51654 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC15.1■□□□□ 0.01
GPC3P51654 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC3P51654 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GPC3P51654 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GPC3P51654 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC3P51654 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GPC3P51654 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC3P51654 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC3P51654 U3.5-201ENST00000363448 216 ntBASIC15.1■□□□□ 0.01
GPC3P51654 RHOC-205ENST00000369636 786 ntTSL 2 BASIC15.1■□□□□ 0.01
GPC3P51654 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GPC3P51654 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC15.1■□□□□ 0.01
GPC3P51654 RPL10-203ENST00000406022 748 ntTSL 3 BASIC15.1■□□□□ 0.01
GPC3P51654 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.1■□□□□ 0.01
GPC3P51654 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC15.1■□□□□ 0.01
GPC3P51654 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GPC3P51654 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC15.1■□□□□ 0.01
GPC3P51654 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC15.1■□□□□ 0.01
GPC3P51654 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC15.1■□□□□ 0.01
GPC3P51654 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC15.1■□□□□ 0.01
GPC3P51654 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC3P51654 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.1■□□□□ 0.01
GPC3P51654 AL356740.1-201ENST00000602192 1297 ntBASIC15.1■□□□□ 0.01
GPC3P51654 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GPC3P51654 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC15.1■□□□□ 0.01
GPC3P51654 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC15.1■□□□□ 0.01
GPC3P51654 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC3P51654 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC3P51654 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GPC3P51654 CR383656.2-201ENST00000548656 2254 ntBASIC15.1■□□□□ 0.01
GPC3P51654 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC3P51654 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.1■□□□□ 0.01
GPC3P51654 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GPC3P51654 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.1■□□□□ 0.01
GPC3P51654 DDC-214ENST00000622873 1839 ntTSL 3 BASIC15.1■□□□□ 0.01
GPC3P51654 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC3P51654 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC3P51654 AL109809.1-201ENST00000418979 1367 ntBASIC15.1■□□□□ 0.01
GPC3P51654 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GPC3P51654 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC15.1■□□□□ 0.01
GPC3P51654 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC3P51654 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.09■□□□□ 0.01
GPC3P51654 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC3P51654 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GPC3P51654 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC3P51654 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
GPC3P51654 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.09■□□□□ 0.01
GPC3P51654 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GPC3P51654 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC3P51654 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GPC3P51654 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC3P51654 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
GPC3P51654 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GPC3P51654 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GPC3P51654 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GPC3P51654 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
GPC3P51654 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC3P51654 SURF4-203ENST00000371991 715 ntTSL 3 BASIC15.09■□□□□ 0.01
GPC3P51654 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC3P51654 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.09■□□□□ 0.01
GPC3P51654 KRT17P4-201ENST00000429445 819 ntBASIC15.09■□□□□ 0.01
GPC3P51654 AC005077.3-201ENST00000449614 213 ntBASIC15.09■□□□□ 0.01
GPC3P51654 NALT1-202ENST00000450304 437 ntTSL 3 BASIC15.09■□□□□ 0.01
GPC3P51654 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC3P51654 AC092903.1-201ENST00000466506 262 ntBASIC15.09■□□□□ 0.01
GPC3P51654 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC15.09■□□□□ 0.01
GPC3P51654 AC087203.1-201ENST00000532111 1181 ntBASIC15.09■□□□□ 0.01
GPC3P51654 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
GPC3P51654 THY1-209ENST00000580275 578 ntTSL 3 BASIC15.09■□□□□ 0.01
GPC3P51654 AC026336.4-201ENST00000624565 1050 ntBASIC15.09■□□□□ 0.01
GPC3P51654 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC15.09■□□□□ 0.01
GPC3P51654 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
GPC3P51654 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.09■□□□□ 0.01
GPC3P51654 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
GPC3P51654 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC3P51654 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
GPC3P51654 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GPC3P51654 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC3P51654 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GPC3P51654 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC15.08■□□□□ 0.01
GPC3P51654 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
GPC3P51654 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms