Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRCA2P51587 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRCA2P51587 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
BRCA2P51587 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.67□□□□□ -0.06
BRCA2P51587 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
BRCA2P51587 HAMP-201ENST00000222304 558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRCA2P51587 HLA-DRB9-201ENST00000449413 343 ntBASIC14.67□□□□□ -0.06
BRCA2P51587 OR7E14P-201ENST00000526721 1000 ntBASIC14.67□□□□□ -0.06
BRCA2P51587 FAM86B1-215ENST00000533513 725 ntTSL 5 BASIC14.67□□□□□ -0.06
BRCA2P51587 Metazoa_SRP.68-201ENST00000612673 282 ntBASIC14.67□□□□□ -0.06
BRCA2P51587 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC14.67□□□□□ -0.06
BRCA2P51587 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
BRCA2P51587 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BRCA2P51587 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BRCA2P51587 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC14.67□□□□□ -0.06
BRCA2P51587 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 APTX-203ENST00000379813 1121 ntTSL 5 BASIC14.66□□□□□ -0.06
BRCA2P51587 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 AC006001.3-205ENST00000428370 579 ntBASIC14.66□□□□□ -0.06
BRCA2P51587 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC14.66□□□□□ -0.06
BRCA2P51587 LINC02074-201ENST00000581028 569 ntTSL 4 BASIC14.66□□□□□ -0.06
BRCA2P51587 LINC02074-202ENST00000584003 573 ntTSL 4 BASIC14.66□□□□□ -0.06
BRCA2P51587 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.66□□□□□ -0.06
BRCA2P51587 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
BRCA2P51587 RARRES3-202ENST00000354445 696 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
BRCA2P51587 RBM14-203ENST00000409372 876 ntTSL 2 BASIC14.66□□□□□ -0.06
BRCA2P51587 AKR1C5P-201ENST00000427165 609 ntBASIC14.66□□□□□ -0.06
BRCA2P51587 RN7SL229P-201ENST00000495651 299 ntBASIC14.66□□□□□ -0.06
BRCA2P51587 AC022447.6-201ENST00000515522 438 ntBASIC14.66□□□□□ -0.06
BRCA2P51587 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC14.66□□□□□ -0.06
BRCA2P51587 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
BRCA2P51587 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 CR383656.2-201ENST00000548656 2254 ntBASIC14.66□□□□□ -0.06
BRCA2P51587 AC008038.1-201ENST00000634247 1314 ntBASIC14.66□□□□□ -0.06
BRCA2P51587 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
BRCA2P51587 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.66□□□□□ -0.06
BRCA2P51587 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 PCDHA6-201ENST00000378126 3267 ntBASIC14.66□□□□□ -0.06
BRCA2P51587 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
BRCA2P51587 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
BRCA2P51587 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC14.66□□□□□ -0.06
BRCA2P51587 IGHV3-60-201ENST00000521678 354 ntBASIC14.66□□□□□ -0.06
BRCA2P51587 MIR7848-201ENST00000617402 101 ntBASIC14.66□□□□□ -0.06
BRCA2P51587 PSMB3-211ENST00000619426 773 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 CGREF1-209ENST00000640154 336 ntTSL 5 BASIC14.66□□□□□ -0.06
BRCA2P51587 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.66□□□□□ -0.06
BRCA2P51587 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
BRCA2P51587 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRCA2P51587 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
BRCA2P51587 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC14.65□□□□□ -0.06
BRCA2P51587 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.65□□□□□ -0.06
BRCA2P51587 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRCA2P51587 AGFG1-203ENST00000409171 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRCA2P51587 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.65□□□□□ -0.06
BRCA2P51587 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRCA2P51587 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
BRCA2P51587 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
BRCA2P51587 AADAC-202ENST00000488869 719 ntTSL 2 BASIC14.65□□□□□ -0.06
BRCA2P51587 AC092745.1-201ENST00000535746 603 ntTSL 5 BASIC14.65□□□□□ -0.06
BRCA2P51587 AC002351.1-201ENST00000546852 590 ntTSL 2 BASIC14.65□□□□□ -0.06
BRCA2P51587 AC091132.3-201ENST00000579701 470 ntBASIC14.65□□□□□ -0.06
BRCA2P51587 AC138645.1-201ENST00000582765 470 ntBASIC14.65□□□□□ -0.06
BRCA2P51587 AC090093.1-201ENST00000611315 271 ntBASIC14.65□□□□□ -0.06
BRCA2P51587 FAM92B-203ENST00000629253 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRCA2P51587 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.65□□□□□ -0.06
BRCA2P51587 CEP70-208ENST00000474781 2028 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
BRCA2P51587 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.65□□□□□ -0.06
BRCA2P51587 TUBB8P4-201ENST00000511806 1324 ntBASIC14.65□□□□□ -0.06
BRCA2P51587 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC14.65□□□□□ -0.06
BRCA2P51587 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC14.65□□□□□ -0.06
BRCA2P51587 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
BRCA2P51587 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRCA2P51587 ST5-258ENST00000534278 1352 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
BRCA2P51587 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
BRCA2P51587 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRCA2P51587 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRCA2P51587 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC14.65□□□□□ -0.06
BRCA2P51587 RPE-208ENST00000436630 1128 ntTSL 2 BASIC14.65□□□□□ -0.06
BRCA2P51587 MTND6P9-201ENST00000458075 519 ntBASIC14.65□□□□□ -0.06
BRCA2P51587 RBP5-202ENST00000542370 564 ntTSL 2 BASIC14.65□□□□□ -0.06
BRCA2P51587 AC137932.2-201ENST00000562995 1205 ntTSL 2 BASIC14.65□□□□□ -0.06
BRCA2P51587 AC016397.2-201ENST00000624848 1985 ntBASIC14.65□□□□□ -0.06
BRCA2P51587 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.65□□□□□ -0.06
BRCA2P51587 KIR3DL3-201ENST00000291860 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BRCA2P51587 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
BRCA2P51587 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
BRCA2P51587 SLC26A5-211ENST00000432958 2588 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms