Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC14.75□□□□□ -0.05
SSR1P43307 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.75□□□□□ -0.05
SSR1P43307 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.75□□□□□ -0.05
SSR1P43307 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC14.75□□□□□ -0.05
SSR1P43307 PCDHB17P-202ENST00000623466 3066 ntBASIC14.75□□□□□ -0.05
SSR1P43307 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.75□□□□□ -0.05
SSR1P43307 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SSR1P43307 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.75□□□□□ -0.05
SSR1P43307 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SSR1P43307 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC14.75□□□□□ -0.05
SSR1P43307 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SSR1P43307 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC14.75□□□□□ -0.05
SSR1P43307 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.75□□□□□ -0.05
SSR1P43307 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.74□□□□□ -0.05
SSR1P43307 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
SSR1P43307 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 LINC01165-201ENST00000445190 1623 ntBASIC14.74□□□□□ -0.05
SSR1P43307 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SSR1P43307 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.74□□□□□ -0.05
SSR1P43307 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.74□□□□□ -0.05
SSR1P43307 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.74□□□□□ -0.05
SSR1P43307 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SSR1P43307 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.74□□□□□ -0.05
SSR1P43307 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.74□□□□□ -0.05
SSR1P43307 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.74□□□□□ -0.05
SSR1P43307 NKAIN1P1-201ENST00000435754 582 ntBASIC14.74□□□□□ -0.05
SSR1P43307 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.74□□□□□ -0.05
SSR1P43307 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.74□□□□□ -0.05
SSR1P43307 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SSR1P43307 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.74□□□□□ -0.05
SSR1P43307 AC093752.3-201ENST00000567343 901 ntBASIC14.74□□□□□ -0.05
SSR1P43307 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.74□□□□□ -0.05
SSR1P43307 RN7SL219P-201ENST00000582872 296 ntBASIC14.74□□□□□ -0.05
SSR1P43307 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.74□□□□□ -0.05
SSR1P43307 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.74□□□□□ -0.05
SSR1P43307 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC14.74□□□□□ -0.05
SSR1P43307 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SSR1P43307 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.74□□□□□ -0.05
SSR1P43307 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SSR1P43307 AC025183.3-201ENST00000623526 1482 ntBASIC14.74□□□□□ -0.05
SSR1P43307 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.74□□□□□ -0.05
SSR1P43307 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.74□□□□□ -0.05
SSR1P43307 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.74□□□□□ -0.05
SSR1P43307 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SSR1P43307 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.74□□□□□ -0.05
SSR1P43307 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SSR1P43307 AC012313.8-201ENST00000595059 5402 ntBASIC14.74□□□□□ -0.05
SSR1P43307 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSR1P43307 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.73□□□□□ -0.05
SSR1P43307 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.73□□□□□ -0.05
SSR1P43307 AC125807.2-201ENST00000513358 3514 ntBASIC14.73□□□□□ -0.05
SSR1P43307 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SSR1P43307 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.73□□□□□ -0.05
SSR1P43307 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.73□□□□□ -0.05
SSR1P43307 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSR1P43307 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms