Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC18■□□□□ 0.47
USP6P35125 HNRNPA1P11-201ENST00000580106 956 ntBASIC18■□□□□ 0.47
USP6P35125 MIR4526-201ENST00000583168 87 ntBASIC18■□□□□ 0.47
USP6P35125 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC18■□□□□ 0.47
USP6P35125 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC18■□□□□ 0.47
USP6P35125 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC18■□□□□ 0.47
USP6P35125 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC18■□□□□ 0.47
USP6P35125 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18■□□□□ 0.47
USP6P35125 AC009093.9-201ENST00000566038 1611 ntBASIC18■□□□□ 0.47
USP6P35125 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18■□□□□ 0.47
USP6P35125 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
USP6P35125 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 AC005154.3-201ENST00000419639 1393 ntBASIC18■□□□□ 0.47
USP6P35125 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC18■□□□□ 0.47
USP6P35125 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USP6P35125 FKBP4P1-201ENST00000507284 1347 ntBASIC17.99■□□□□ 0.47
USP6P35125 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP6P35125 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC17.99■□□□□ 0.47
USP6P35125 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP6P35125 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP6P35125 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP6P35125 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP6P35125 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC17.99■□□□□ 0.47
USP6P35125 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC17.99■□□□□ 0.47
USP6P35125 HMGN1P4-201ENST00000419500 290 ntBASIC17.99■□□□□ 0.47
USP6P35125 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC17.99■□□□□ 0.47
USP6P35125 POLR2LP1-206ENST00000444785 187 ntBASIC17.99■□□□□ 0.47
USP6P35125 DERL1-204ENST00000519018 575 ntTSL 4 BASIC17.99■□□□□ 0.47
USP6P35125 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC17.99■□□□□ 0.47
USP6P35125 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC17.99■□□□□ 0.47
USP6P35125 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC17.99■□□□□ 0.47
USP6P35125 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC17.99■□□□□ 0.47
USP6P35125 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC17.99■□□□□ 0.47
USP6P35125 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC17.99■□□□□ 0.47
USP6P35125 AC073862.3-201ENST00000624597 1648 ntBASIC17.99■□□□□ 0.47
USP6P35125 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
USP6P35125 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP6P35125 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP6P35125 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP6P35125 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
USP6P35125 GDA-203ENST00000376986 1771 ntTSL 2 BASIC17.99■□□□□ 0.47
USP6P35125 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP6P35125 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
USP6P35125 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP6P35125 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
USP6P35125 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 AC009474.1-201ENST00000455096 1565 ntBASIC17.98■□□□□ 0.47
USP6P35125 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC17.98■□□□□ 0.47
USP6P35125 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 TPI1P3-201ENST00000335020 740 ntBASIC17.98■□□□□ 0.47
USP6P35125 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC17.98■□□□□ 0.47
USP6P35125 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC17.98■□□□□ 0.47
USP6P35125 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
USP6P35125 NAA10-205ENST00000393712 908 ntTSL 5 BASIC17.98■□□□□ 0.47
USP6P35125 OLA1P2-201ENST00000395519 1264 ntBASIC17.98■□□□□ 0.47
USP6P35125 PGAM1P10-201ENST00000402426 761 ntBASIC17.98■□□□□ 0.47
USP6P35125 RPSAP61-201ENST00000412542 878 ntBASIC17.98■□□□□ 0.47
USP6P35125 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC17.98■□□□□ 0.47
USP6P35125 SAP18P2-201ENST00000434334 459 ntBASIC17.98■□□□□ 0.47
USP6P35125 AC008267.3-201ENST00000448776 712 ntBASIC17.98■□□□□ 0.47
USP6P35125 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC17.98■□□□□ 0.47
USP6P35125 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
USP6P35125 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC17.98■□□□□ 0.47
USP6P35125 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
USP6P35125 AL353622.2-201ENST00000605846 425 ntBASIC17.98■□□□□ 0.47
USP6P35125 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC17.98■□□□□ 0.47
USP6P35125 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 AL022323.5-201ENST00000624101 2059 ntBASIC17.98■□□□□ 0.47
USP6P35125 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
USP6P35125 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.98■□□□□ 0.47
USP6P35125 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
USP6P35125 AC005014.1-201ENST00000432006 2976 ntBASIC17.98■□□□□ 0.47
USP6P35125 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
USP6P35125 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
USP6P35125 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.98■□□□□ 0.47
USP6P35125 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC17.98■□□□□ 0.47
USP6P35125 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
USP6P35125 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP6P35125 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms