Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR3DP05423 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC16.41■□□□□ 0.22
POLR3DP05423 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.41■□□□□ 0.22
POLR3DP05423 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
POLR3DP05423 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR3DP05423 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR3DP05423 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
POLR3DP05423 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
POLR3DP05423 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC16.41■□□□□ 0.22
POLR3DP05423 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC16.41■□□□□ 0.22
POLR3DP05423 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR3DP05423 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
POLR3DP05423 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR3DP05423 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
POLR3DP05423 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
POLR3DP05423 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR3DP05423 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR3DP05423 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
POLR3DP05423 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.41■□□□□ 0.22
POLR3DP05423 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
POLR3DP05423 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC16.41■□□□□ 0.22
POLR3DP05423 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR3DP05423 RN7SL396P-201ENST00000471086 295 ntBASIC16.41■□□□□ 0.22
POLR3DP05423 HNRNPA1P56-201ENST00000505767 954 ntBASIC16.41■□□□□ 0.22
POLR3DP05423 AC026410.1-201ENST00000507366 1101 ntBASIC16.41■□□□□ 0.22
POLR3DP05423 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.41■□□□□ 0.22
POLR3DP05423 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC16.41■□□□□ 0.22
POLR3DP05423 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
POLR3DP05423 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
POLR3DP05423 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
POLR3DP05423 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.41■□□□□ 0.22
POLR3DP05423 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
POLR3DP05423 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR3DP05423 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR3DP05423 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR3DP05423 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC16.41■□□□□ 0.22
POLR3DP05423 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
POLR3DP05423 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
POLR3DP05423 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
POLR3DP05423 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR3DP05423 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR3DP05423 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR3DP05423 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
POLR3DP05423 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
POLR3DP05423 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC16.41■□□□□ 0.22
POLR3DP05423 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC16.4■□□□□ 0.22
POLR3DP05423 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 PEG13-201ENST00000631594 5667 ntBASIC16.4■□□□□ 0.22
POLR3DP05423 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 ADAMTS7P1-201ENST00000613213 4793 ntBASIC16.4■□□□□ 0.22
POLR3DP05423 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
POLR3DP05423 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC16.4■□□□□ 0.22
POLR3DP05423 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.4■□□□□ 0.22
POLR3DP05423 BCAS2P2-201ENST00000425064 674 ntBASIC16.4■□□□□ 0.22
POLR3DP05423 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC16.4■□□□□ 0.22
POLR3DP05423 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.4■□□□□ 0.22
POLR3DP05423 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.4■□□□□ 0.22
POLR3DP05423 KRT18P37-201ENST00000520711 1282 ntBASIC16.4■□□□□ 0.22
POLR3DP05423 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC16.4■□□□□ 0.22
POLR3DP05423 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.4■□□□□ 0.22
POLR3DP05423 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 FOXN3-AS2-201ENST00000554071 1262 ntBASIC16.4■□□□□ 0.22
POLR3DP05423 C2orf69P1-201ENST00000563532 1093 ntBASIC16.4■□□□□ 0.22
POLR3DP05423 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.4■□□□□ 0.22
POLR3DP05423 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.4■□□□□ 0.22
POLR3DP05423 MIR8071-1-201ENST00000616769 65 ntBASIC16.4■□□□□ 0.22
POLR3DP05423 MIR8071-2-201ENST00000616772 65 ntBASIC16.4■□□□□ 0.22
POLR3DP05423 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
POLR3DP05423 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
POLR3DP05423 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
POLR3DP05423 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
POLR3DP05423 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC16.4■□□□□ 0.22
POLR3DP05423 AF013593.1-201ENST00000458074 1487 ntBASIC16.4■□□□□ 0.22
POLR3DP05423 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
POLR3DP05423 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 CICP8-201ENST00000455800 2813 ntBASIC16.4■□□□□ 0.22
POLR3DP05423 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
POLR3DP05423 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.4■□□□□ 0.22
POLR3DP05423 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
POLR3DP05423 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
POLR3DP05423 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
POLR3DP05423 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.4■□□□□ 0.22
POLR3DP05423 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC16.4■□□□□ 0.22
POLR3DP05423 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms