Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AP3S1Q92572 PISD-203ENST00000397500 2194 ntTSL 5 BASIC12.15□□□□□ -0.47
AP3S1Q92572 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
AP3S1Q92572 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.15□□□□□ -0.47
AP3S1Q92572 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
AP3S1Q92572 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
AP3S1Q92572 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC12.15□□□□□ -0.47
AP3S1Q92572 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC12.14□□□□□ -0.47
AP3S1Q92572 AC020763.3-201ENST00000625095 2904 ntBASIC12.14□□□□□ -0.47
AP3S1Q92572 AL008718.2-201ENST00000609206 1313 ntBASIC12.14□□□□□ -0.47
AP3S1Q92572 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S1Q92572 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC12.14□□□□□ -0.47
AP3S1Q92572 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S1Q92572 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC12.14□□□□□ -0.47
AP3S1Q92572 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S1Q92572 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S1Q92572 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
AP3S1Q92572 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
AP3S1Q92572 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
AP3S1Q92572 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.14□□□□□ -0.47
AP3S1Q92572 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.14□□□□□ -0.47
AP3S1Q92572 AC254562.1-201ENST00000417586 456 ntBASIC12.14□□□□□ -0.47
AP3S1Q92572 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.14□□□□□ -0.47
AP3S1Q92572 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.14□□□□□ -0.47
AP3S1Q92572 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.14□□□□□ -0.47
AP3S1Q92572 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S1Q92572 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S1Q92572 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S1Q92572 KRT126P-201ENST00000549467 1181 ntBASIC12.14□□□□□ -0.47
AP3S1Q92572 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.14□□□□□ -0.47
AP3S1Q92572 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S1Q92572 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.14□□□□□ -0.47
AP3S1Q92572 AC145423.3-201ENST00000615987 467 ntBASIC12.14□□□□□ -0.47
AP3S1Q92572 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S1Q92572 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S1Q92572 AC008132.1-202ENST00000342005 1389 ntBASIC12.14□□□□□ -0.47
AP3S1Q92572 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC12.14□□□□□ -0.47
AP3S1Q92572 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC12.14□□□□□ -0.47
AP3S1Q92572 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 AF013593.1-201ENST00000458074 1487 ntBASIC12.14□□□□□ -0.47
AP3S1Q92572 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
AP3S1Q92572 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP3S1Q92572 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.13□□□□□ -0.47
AP3S1Q92572 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 LINC00115-201ENST00000473798 1317 ntBASIC12.13□□□□□ -0.47
AP3S1Q92572 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 MCU-204ENST00000536019 3224 ntTSL 2 BASIC12.13□□□□□ -0.47
AP3S1Q92572 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.13□□□□□ -0.47
AP3S1Q92572 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC12.13□□□□□ -0.47
AP3S1Q92572 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC12.13□□□□□ -0.47
AP3S1Q92572 BX537318.2-201ENST00000624893 4162 ntBASIC12.13□□□□□ -0.47
AP3S1Q92572 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 SPDYE19P-201ENST00000338590 713 ntBASIC12.13□□□□□ -0.47
AP3S1Q92572 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP3S1Q92572 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
AP3S1Q92572 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.13□□□□□ -0.47
AP3S1Q92572 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms