Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 AL031432.4-201ENST00000641729 2190 ntBASIC14.26□□□□□ -0.13
CCDC25Q86WR0 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 AC012531.1-201ENST00000562848 2680 ntBASIC14.26□□□□□ -0.13
CCDC25Q86WR0 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 AC079178.1-201ENST00000420915 656 ntBASIC14.26□□□□□ -0.13
CCDC25Q86WR0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 RN7SL692P-201ENST00000464677 288 ntBASIC14.26□□□□□ -0.13
CCDC25Q86WR0 SCARNA21-201ENST00000517026 139 ntBASIC14.26□□□□□ -0.13
CCDC25Q86WR0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 AC027307.3-201ENST00000594262 1100 ntBASIC14.26□□□□□ -0.13
CCDC25Q86WR0 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC25Q86WR0 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 AC026954.1-201ENST00000429771 1293 ntBASIC14.25□□□□□ -0.13
CCDC25Q86WR0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 CHCHD2P2-201ENST00000503744 321 ntBASIC14.25□□□□□ -0.13
CCDC25Q86WR0 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 AL356740.1-201ENST00000602192 1297 ntBASIC14.25□□□□□ -0.13
CCDC25Q86WR0 AC244157.2-201ENST00000616239 1006 ntBASIC14.25□□□□□ -0.13
CCDC25Q86WR0 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 CICP9-201ENST00000444451 1913 ntBASIC14.25□□□□□ -0.13
CCDC25Q86WR0 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC25Q86WR0 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms