Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD4Q5XG99 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD4Q5XG99 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD4Q5XG99 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD4Q5XG99 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD4Q5XG99 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD4Q5XG99 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD4Q5XG99 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC13.32□□□□□ -0.28
LYSMD4Q5XG99 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
LYSMD4Q5XG99 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD4Q5XG99 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD4Q5XG99 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LYSMD4Q5XG99 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 CASP2-203ENST00000392925 616 ntTSL 3 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 SERF2-205ENST00000403425 690 ntTSL 2 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 RPL14-203ENST00000416518 812 ntTSL 3 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 RFNG-202ENST00000429557 994 ntTSL 5 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 GAPDHP29-201ENST00000429913 985 ntBASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 AL954722.1-201ENST00000431238 259 ntBASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 OR4C14P-201ENST00000440929 923 ntBASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 UGT1A12P-201ENST00000447084 853 ntBASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 HNRNPA1P4-201ENST00000509706 756 ntBASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 AC142086.5-202ENST00000562500 217 ntBASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 AC034205.3-201ENST00000603595 1376 ntBASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.31□□□□□ -0.28
LYSMD4Q5XG99 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 NOS2P3-201ENST00000411468 867 ntBASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC13.3□□□□□ -0.28
LYSMD4Q5XG99 NOS2P2-201ENST00000426269 867 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms