Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC12.99□□□□□ -0.33
RAE1P78406 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.99□□□□□ -0.33
RAE1P78406 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.99□□□□□ -0.33
RAE1P78406 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RAE1P78406 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.99□□□□□ -0.33
RAE1P78406 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RAE1P78406 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RAE1P78406 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RAE1P78406 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.99□□□□□ -0.33
RAE1P78406 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.99□□□□□ -0.33
RAE1P78406 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.99□□□□□ -0.33
RAE1P78406 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.99□□□□□ -0.33
RAE1P78406 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
RAE1P78406 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.99□□□□□ -0.33
RAE1P78406 MRPL22P1-201ENST00000505398 616 ntBASIC12.99□□□□□ -0.33
RAE1P78406 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.99□□□□□ -0.33
RAE1P78406 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.99□□□□□ -0.33
RAE1P78406 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.99□□□□□ -0.33
RAE1P78406 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.99□□□□□ -0.33
RAE1P78406 AL132994.1-201ENST00000554098 400 ntBASIC12.99□□□□□ -0.33
RAE1P78406 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.99□□□□□ -0.33
RAE1P78406 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.99□□□□□ -0.33
RAE1P78406 MIR2392-201ENST00000584881 84 ntBASIC12.99□□□□□ -0.33
RAE1P78406 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.99□□□□□ -0.33
RAE1P78406 CU633904.3-201ENST00000624042 1029 ntBASIC12.99□□□□□ -0.33
RAE1P78406 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.99□□□□□ -0.33
RAE1P78406 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
RAE1P78406 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
RAE1P78406 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC12.99□□□□□ -0.33
RAE1P78406 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.99□□□□□ -0.33
RAE1P78406 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAE1P78406 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.99□□□□□ -0.33
RAE1P78406 PCDHA5-203ENST00000614258 4248 ntBASIC12.99□□□□□ -0.33
RAE1P78406 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.98□□□□□ -0.33
RAE1P78406 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
RAE1P78406 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RAE1P78406 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RAE1P78406 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RAE1P78406 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.98□□□□□ -0.33
RAE1P78406 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 AC007274.2-201ENST00000421675 662 ntBASIC12.98□□□□□ -0.33
RAE1P78406 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC12.98□□□□□ -0.33
RAE1P78406 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC12.98□□□□□ -0.33
RAE1P78406 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.98□□□□□ -0.33
RAE1P78406 AL133466.1-201ENST00000447582 150 ntBASIC12.98□□□□□ -0.33
RAE1P78406 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.98□□□□□ -0.33
RAE1P78406 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.98□□□□□ -0.33
RAE1P78406 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.98□□□□□ -0.33
RAE1P78406 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RAE1P78406 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC12.98□□□□□ -0.33
RAE1P78406 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.98□□□□□ -0.33
RAE1P78406 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RAE1P78406 AC138701.2-201ENST00000553634 226 ntBASIC12.98□□□□□ -0.33
RAE1P78406 CHMP4BP1-201ENST00000556017 588 ntBASIC12.98□□□□□ -0.33
RAE1P78406 DNM1P51-201ENST00000558149 522 ntBASIC12.98□□□□□ -0.33
RAE1P78406 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAE1P78406 SNORD3B-1-201ENST00000577988 758 ntBASIC12.98□□□□□ -0.33
RAE1P78406 AC103810.3-201ENST00000583567 96 ntBASIC12.98□□□□□ -0.33
RAE1P78406 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.98□□□□□ -0.33
RAE1P78406 AL009176.1-201ENST00000607876 650 ntBASIC12.98□□□□□ -0.33
RAE1P78406 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC12.98□□□□□ -0.33
RAE1P78406 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.98□□□□□ -0.33
RAE1P78406 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.98□□□□□ -0.33
RAE1P78406 AC011491.1-203ENST00000637688 543 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms