Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN20P56880 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 TEKT4P2-202ENST00000559466 1312 ntBASIC12.67□□□□□ -0.38
CLDN20P56880 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN20P56880 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 KRT8P43-201ENST00000406052 1458 ntBASIC12.67□□□□□ -0.38
CLDN20P56880 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN20P56880 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CLDN20P56880 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN20P56880 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN20P56880 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.67□□□□□ -0.38
CLDN20P56880 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.67□□□□□ -0.38
CLDN20P56880 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.67□□□□□ -0.38
CLDN20P56880 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.67□□□□□ -0.38
CLDN20P56880 KLF17P1-201ENST00000547105 1126 ntBASIC12.67□□□□□ -0.38
CLDN20P56880 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN20P56880 RN7SL665P-201ENST00000578793 300 ntBASIC12.67□□□□□ -0.38
CLDN20P56880 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN20P56880 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN20P56880 AC138894.2-201ENST00000602838 371 ntBASIC12.67□□□□□ -0.38
CLDN20P56880 AC005632.3-201ENST00000605544 308 ntBASIC12.67□□□□□ -0.38
CLDN20P56880 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.67□□□□□ -0.38
CLDN20P56880 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CLDN20P56880 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN20P56880 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN20P56880 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
CLDN20P56880 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN20P56880 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN20P56880 AC006372.4-201ENST00000624122 1543 ntBASIC12.67□□□□□ -0.38
CLDN20P56880 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN20P56880 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN20P56880 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN20P56880 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN20P56880 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN20P56880 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN20P56880 AC015819.3-201ENST00000624305 2674 ntBASIC12.66□□□□□ -0.38
CLDN20P56880 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN20P56880 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN20P56880 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN20P56880 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
CLDN20P56880 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN20P56880 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
CLDN20P56880 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN20P56880 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN20P56880 AC009474.1-201ENST00000455096 1565 ntBASIC12.66□□□□□ -0.38
CLDN20P56880 KRT8P18-201ENST00000413425 1445 ntBASIC12.66□□□□□ -0.38
CLDN20P56880 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN20P56880 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN20P56880 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.66□□□□□ -0.38
CLDN20P56880 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.66□□□□□ -0.38
CLDN20P56880 FTLP1-201ENST00000449155 526 ntBASIC12.66□□□□□ -0.38
CLDN20P56880 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.66□□□□□ -0.38
CLDN20P56880 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.66□□□□□ -0.38
CLDN20P56880 MRPL22P1-201ENST00000505398 616 ntBASIC12.66□□□□□ -0.38
CLDN20P56880 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.66□□□□□ -0.38
CLDN20P56880 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.66□□□□□ -0.38
CLDN20P56880 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.66□□□□□ -0.38
CLDN20P56880 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.66□□□□□ -0.38
CLDN20P56880 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CLDN20P56880 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC12.66□□□□□ -0.38
CLDN20P56880 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.66□□□□□ -0.38
CLDN20P56880 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.66□□□□□ -0.38
CLDN20P56880 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
CLDN20P56880 AC128714.1-201ENST00000637035 887 ntBASIC12.66□□□□□ -0.38
CLDN20P56880 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CLDN20P56880 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.66□□□□□ -0.38
CLDN20P56880 AC010970.1-201ENST00000445125 1848 ntBASIC12.66□□□□□ -0.38
CLDN20P56880 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN20P56880 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN20P56880 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.66□□□□□ -0.38
CLDN20P56880 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN20P56880 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN20P56880 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.66□□□□□ -0.38
CLDN20P56880 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN20P56880 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.66□□□□□ -0.38
CLDN20P56880 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN20P56880 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms